RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 IFI30P13284 250 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 CAPZBP47756 277 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 CCL20P78556 96 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 DEFB103AP81534 67 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 GLO1Q04760 184 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 TMEM97Q5BJF2 176 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 Q6ZTI0 123 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 SLC36A1Q7Z2H8 476 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 CLVS1Q8IUQ0 354 aaPredicted RBP1.76□□□□□ -2.13
VPS13A-209ENST00000467124 RPP25LQ8N5L8 163 aaKnown RBP1.76□□□□□ -2.13
VPS13A-209ENST00000467124 SPACA4Q8TDM5 124 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 XAGE1AQ9HD64 81 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 CYSLTR1Q9Y271 337 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 ARL2BPQ9Y2Y0 163 aa1.76□□□□□ -2.13
VPS13A-209ENST00000467124 FAM32AQ9Y421 112 aaKnown RBP1.76□□□□□ -2.13
VPS13A-209ENST00000467124 DENND4BO75064 1496 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-209ENST00000467124 ROBO3Q96MS0 1386 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 KIAA2026Q5HYC2 2103 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 TRAV9-1A0A075B6T8 112 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 SIGLEC16A6NMB1 481 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 PIRO00625 290 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 ORC5O43913 435 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 HOXA6P31267 233 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 SERPINB9P50453 376 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 Q8NDZ9 215 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 OR52R1Q8NGF1 315 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 OR51A2Q8NGJ7 313 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 CEP19Q96LK0 163 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 PHB2Q99623 299 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 NIPSNAP1Q9BPW8 284 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 KIFC1Q9BW19 673 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 CCDC94Q9BW85 323 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-209ENST00000467124 TLNRD1Q9H1K6 362 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 ENY2Q9NPA8 101 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 TMEM106BQ9NUM4 274 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 AMMECR1Q9Y4X0 333 aaPredicted RBP1.75□□□□□ -2.13
VPS13A-209ENST00000467124 TMEM56-RWDD3S4R434 201 aa1.75□□□□□ -2.13
VPS13A-209ENST00000467124 COL4A2P08572 1712 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 KIF24Q5T7B8 1368 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 hCG_1818297A0A087WSY0 165 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 A8MT66 165 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 HAND1O96004 215 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 IGKV1-16P04430 117 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 MSMBP08118 114 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 HACD4Q5VWC8 232 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 RPL22L1Q6P5R6 122 aaKnown RBP1.74□□□□□ -2.13
VPS13A-209ENST00000467124 KRT222Q8N1A0 295 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 MCFD2Q8NI22 146 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 H1FXQ92522 213 aaKnown RBP1.74□□□□□ -2.13
VPS13A-209ENST00000467124 SLC7A6Q92536 515 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 BORCS7Q96B45 105 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 DOHHQ9BU89 302 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 C9orf16Q9BUW7 83 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 CCDC90BQ9GZT6 254 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 CHST6Q9GZX3 395 aa1.74□□□□□ -2.13
VPS13A-209ENST00000467124 CCDC88AQ3V6T2 1871 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 DOCK5Q9H7D0 1870 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 KDM5BQ9UGL1 1544 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 ZNF860A6NHJ4 632 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 BUB1B-PAK6H3BSN5 160 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 ZNF737O75373 536 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 PPP1R2P41236 205 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 MOGQ16653 247 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 C12orf74Q32Q52 190 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 LIN52Q52LA3 116 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 IBA57Q5T440 356 aaKnown RBP1.73□□□□□ -2.13
VPS13A-209ENST00000467124 PPP1R2P3Q6NXS1 205 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 SLC25A40Q8TBP6 338 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 CT55Q8WUE5 264 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 TOMM6Q96B49 74 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 ZNF625Q96I27 306 aaPredicted RBP1.73□□□□□ -2.13
VPS13A-209ENST00000467124 GINS4Q9BRT9 223 aa1.73□□□□□ -2.13
VPS13A-209ENST00000467124 MAST2Q6P0Q8 1798 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 IRGMA1A4Y4 181 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 C1orf196B1AJZ1 125 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 CLDN25C9JDP6 229 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 CIAO1O76071 339 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 EMP1P54849 157 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 HIST1H4AP62805 103 aaKnown RBP1.72□□□□□ -2.13
VPS13A-209ENST00000467124 TMED2Q15363 201 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 IAH1Q2TAA2 248 aaPredicted RBP1.72□□□□□ -2.13
VPS13A-209ENST00000467124 PCOTHQ58A44 107 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 FAM173BQ6P4H8 233 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 GDPD1Q8N9F7 314 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 OR52L1Q8NGH7 329 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 OR10X1Q8NGY0 326 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 BTF3L4Q96K17 158 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 OPTCQ9UBM4 332 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 PIK3C2GO75747 1445 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 MALRD1Q5VYJ5 2156 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 NUP155O75694 1391 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 GREB1Q4ZG55 1949 aa1.72□□□□□ -2.13
VPS13A-209ENST00000467124 MEIS3P1A6NDR6 274 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 OR7C1O76099 320 aaPredicted RBP1.71□□□□□ -2.14
VPS13A-209ENST00000467124 C1QAP02745 245 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 SHBGP04278 402 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 SERPINE1P05121 402 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 UBBP0CG47 229 aa1.71□□□□□ -2.14
VPS13A-209ENST00000467124 CRYGAP11844 174 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms