RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 GLO1Q04760 184 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 TAF1AQ15573 450 aaPredicted RBP1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 ZNF791Q3KP31 576 aaPredicted RBP1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 Q6ZTI0 123 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 OOSP2Q86WS3 158 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 GDPD1Q8N9F7 314 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 OR13C4Q8NGS5 318 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 MCFD2Q8NI22 146 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 PHOSPHO2Q8TCD6 241 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 TOMM6Q96B49 74 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 CEP19Q96LK0 163 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 DERL1Q9BUN8 251 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 CCDC90BQ9GZT6 254 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 IL20Q9NYY1 176 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 NCOA1Q15788 1441 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 MUC6Q6W4X9 2439 aa1.65□□□□□ -2.15
PRPF40A-205ENST00000467114 SLC22A1O15245 554 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 IGKV1-5P01602 117 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 PPBPP02775 128 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 SERPINE1P05121 402 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 LRRC28Q86X40 367 aaPredicted RBP1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 DYNAPQ8N1N2 210 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 OR10X1Q8NGY0 326 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 TXNDC17Q9BRA2 123 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 DOHHQ9BU89 302 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 C20orf27Q9GZN8 174 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 CHST6Q9GZX3 395 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 CXCL16Q9H2A7 254 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 TP73-AS1Q9UF72 201 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 SAMHD1Q9Y3Z3 626 aaKnown RBP1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 FAM32AQ9Y421 112 aaKnown RBP1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 ARL5AQ9Y689 179 aa1.64□□□□□ -2.15
PRPF40A-205ENST00000467114 ROBO3Q96MS0 1386 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 ADGRB3O60242 1522 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 hCG_1818297A0A087WSY0 165 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 A8MT66 165 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 OR2B3O76000 313 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 IFNA10P01566 189 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 RBP1P09455 135 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 SMIM10L2AP0DMW4 78 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 SMIM10L2BP0DMW5 78 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 RPS4Y1P22090 263 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 MAGEA12P43365 314 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 EIF2B2P49770 351 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 C12orf74Q32Q52 190 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 HACD4Q5VWC8 232 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 KTN1-AS1Q86SY8 53 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 KRT222Q8N1A0 295 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 OR52L1Q8NGH7 329 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 H1FXQ92522 213 aaKnown RBP1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 C9orf16Q9BUW7 83 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 TIMM21Q9BVV7 248 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 ENY2Q9NPA8 101 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 PIK3C2GO75747 1445 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 MPDZO75970 2070 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 ZNF532Q9HCE3 1301 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 DOCK5Q9H7D0 1870 aa1.63□□□□□ -2.15
PRPF40A-205ENST00000467114 IGLV3-9A0A075B6K5 115 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 A0A0D9SEW6 157 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 A0A1B0GVG6 124 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 ZNF682O95780 498 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 C8GP07360 202 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 NFYAP23511 347 aaPredicted RBP1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 S100A5P33763 92 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 RELAQ04206 551 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 SLC38A11Q08AI6 406 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 KISS1Q15726 138 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 MOGQ16653 247 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 SPANXN3Q5MJ09 141 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 TEX36Q5VZQ5 186 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 TMEM42Q69YG0 159 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 BPIFA4PQ86YQ2 179 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 Q8NDZ9 215 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 PXT1Q8NFP0 134 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 RASSF5Q8WWW0 418 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 OPTCQ9UBM4 332 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 RTEL1-TNFRSF6BF6WH68 1400 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 HECW2Q9P2P5 1572 aa1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 COL5A3P25940 1745 aaPredicted RBP1.62□□□□□ -2.15
PRPF40A-205ENST00000467114 TRBV10-2A0A0K0K1G8 114 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 FAM159BA6NKW6 160 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 HMSDA8MTL9 139 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 ZNF705FA8MVS1 300 aaPredicted RBP1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 SMIM17P0DL12 118 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 PPIBP23284 216 aaKnown RBP1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 PPP1R2P41236 205 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 SUPT4H1P63272 117 aaKnown RBP1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 TPRXLQ17RH7 258 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 FAM27BQ5VT28 67 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 PPP1R2P3Q6NXS1 205 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 C12orf45Q8N5I9 185 aaPredicted RBP1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 RNASE11Q8TAA1 199 aaKnown RBP1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 GNPDA2Q8TDQ7 276 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 DCANP1Q8TF63 244 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 DNAJC9Q8WXX5 260 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 STOML2Q9UJZ1 356 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 CYSLTR1Q9Y271 337 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 PTPRSQ13332 1948 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 KIAA2026Q5HYC2 2103 aa1.61□□□□□ -2.15
PRPF40A-205ENST00000467114 TTC21AQ8NDW8 1320 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms