RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 TMEM242Q9NWH2 141 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 FAM206AQ9NX38 181 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 SLC25A37Q9NYZ2 338 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 BTRCQ9Y297 605 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF443Q9Y2A4 671 aaPredicted RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 RPL36Q9Y3U8 105 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 LSM5Q9Y4Y9 91 aaKnown RBP2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF780BQ9Y6R6 833 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 PATJQ8NI35 1801 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 HEATR5AQ86XA9 2040 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 COL24A1Q17RW2 1714 aa2.51□□□□□ -2.01
VPS13D-203ENST00000466732 ADAMTS7Q9UKP4 1686 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 A0A0A6YYD5 115 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 C7orf71A4D174 169 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR2T8A6NH00 312 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF860A6NHJ4 632 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CD300LBA8K4G0 201 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF850A8MQ14 1090 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 C9JAW5 83 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 APOC4-APOC2K7ER74 178 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 M0R1X1 148 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 NME4O00746 187 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CDC42EP2O14613 210 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 GSTZ1O43708 216 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 REM1O75628 298 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TRAPPC6AO75865 159 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SFT2D2O95562 160 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR2H2O95918 312 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CYB5AP00167 134 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PTHP01270 115 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CD8AP01732 235 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 IGKV3-11P04433 115 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PIPP12273 146 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CDK2P24941 298 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 RPL22P35268 128 aaKnown RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 G6PCP35575 357 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TPPP2P59282 170 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 YPEL3P61236 119 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 HSPE1P61604 102 aaKnown RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 LCN6P62502 163 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PPP1R1AQ13522 171 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 C4orf26Q17RF5 130 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 LINC01620Q4KN68 170 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SPATA45Q537H7 98 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TCEAL5Q5H9L2 206 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 C1orf220Q5T0J3 134 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TEX36Q5VZQ5 186 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TNFAIP8L2Q6P589 184 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 Q6ZT83 130 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM179BQ7Z7N9 219 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PPP1R27Q86WC6 154 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 C1orf174Q8IYL3 243 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SAXO1Q8IYX7 474 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 RNF175Q8N4F7 328 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ZDHHC22Q8N966 263 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF709Q8N972 641 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 VN1R2Q8NFZ6 395 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR8G5Q8NG78 346 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR8B12Q8NGG6 310 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR51A4Q8NGJ6 313 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR52I1Q8NGK6 324 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR4C13Q8NGP0 309 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 OR1L8Q8NGR8 309 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ACER1Q8TDN7 264 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 THEM6Q8WUY1 208 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 MBD3L1Q8WWY6 194 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 FAM104AQ969W3 186 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PPCDCQ96CD2 204 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 LRRC58Q96CX6 371 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM101Q96IK0 257 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 ZNF488Q96MN9 340 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 AP1S3Q96PC3 154 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 DERL3Q96Q80 235 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SDF2Q99470 211 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SLC35B3Q9H1N7 401 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SH2D2AQ9NP31 389 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 KCNJ16Q9NPI9 418 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 PRTFDC1Q9NRG1 225 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 NDUFB11Q9NX14 153 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 IDI2-AS1Q9NZ38 188 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 CES1P1Q9UKY3 287 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 HIGD1AQ9Y241 93 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 POLDIP2Q9Y2S7 368 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 COQ4Q9Y3A0 265 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SOX21Q9Y651 276 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 SLIT2O94813 1529 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 COL1A1P02452 1464 aaPredicted RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 TNRC6CQ9HCJ0 1690 aaKnown RBP2.5□□□□□ -2.01
VPS13D-203ENST00000466732 KMT2EQ8IZD2 1858 aa2.5□□□□□ -2.01
VPS13D-203ENST00000466732 FANCMQ8IYD8 2048 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 RGPD3A6NKT7 1758 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-203ENST00000466732 WDR90Q96KV7 1748 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TRAV14DV4A0A0A6YYC5 116 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TRBV9A0A0B4J1U6 114 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TRAV8-6A0A0B4J262 113 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 DUXBA0A1W2PPF3 345 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 MEIS3P1A6NDR6 274 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 TMEM212A6NML5 194 aa2.49□□□□□ -2.01
VPS13D-203ENST00000466732 C9JQL5 133 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms