RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 EXTL2Q9UBQ6 330 aa10.54□□□□□ -0.72
CACNA1C-224ENST00000465934 PRNDQ9UKY0 176 aa10.54□□□□□ -0.72
CACNA1C-224ENST00000465934 CD3DP04234 171 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 C8orf88P0DMB2 117 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 LPCAT3Q6P1A2 487 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 MZT2AQ6P582 158 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 TMEM190Q8WZ59 177 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 AP3S1Q92572 193 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 ISOC1Q96CN7 298 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 MIXL1Q9H2W2 232 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 PALMDQ9NP74 551 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 LYSTQ99698 3801 aa10.53□□□□□ -0.72
CACNA1C-224ENST00000465934 PGAM2P15259 253 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 S100GP29377 79 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 ADMP35318 185 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 SPCS2Q15005 226 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 RNASE10Q5GAN6 216 aaKnown RBP10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 H2BFWTQ7Z2G1 175 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 UBAC2Q8NBM4 344 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 ZNF414Q96IQ9 312 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 TSC22D3Q99576 134 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 FAM212BQ9NTI7 297 aaPredicted RBP10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 MTFP1Q9UDX5 166 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 UFC1Q9Y3C8 167 aa10.52□□□□□ -0.73
CACNA1C-224ENST00000465934 CYB5BO43169 146 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 ZNF207O43670 478 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 IGKV1-5P01602 117 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 IGHV3-48P01763 117 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 IFNA6P05013 189 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 ALDH3B2P48448 385 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 PPP5CP53041 499 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 PIGPP57054 158 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 SPINK9Q5DT21 86 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 SLC16A13Q7RTY0 426 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 OR52B4Q8NGK2 314 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 OR4A16Q8NH70 328 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 MARC2Q969Z3 335 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 TMEM56Q96MV1 263 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 TP53RKQ96S44 253 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 MRPS26Q9BYN8 205 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 FKBP11Q9NYL4 201 aa10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 MRPL27Q9P0M9 148 aaKnown RBP10.51□□□□□ -0.73
CACNA1C-224ENST00000465934 CTDSP2O14595 271 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 ELLP55199 621 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 RND3P61587 244 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 PRCDQ00LT1 54 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 Q56UQ5 140 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 FAAP20Q6NZ36 180 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 GPR141Q7Z602 305 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 OR1P1Q8NH06 330 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 MISP3Q96FF7 219 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 C20orf24Q9BUV8 137 aa10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 DAZ1Q9NQZ3 744 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-224ENST00000465934 I3L2K1 104 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 RGS5O15539 181 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 CTSGP08311 255 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 SP6Q3SY56 376 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 SCGB2B2Q4G0G5 96 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 SPSB3Q6PJ21 355 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 RBPMS2Q6ZRY4 209 aaKnown RBP10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 ARRDC1Q8N5I2 433 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 OR1L6Q8NGR2 347 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 OR13C8Q8NGS7 320 aa10.49□□□□□ -0.73
CACNA1C-224ENST00000465934 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 A0A0B4J293 547 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 NDUFA4O00483 81 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 CD74P04233 296 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 P0C879 139 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 TBPP20226 339 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 HSPE1P61604 102 aaKnown RBP10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 TMEM229BQ8NBD8 167 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 ZNF114Q8NC26 417 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 ZNF486Q96H40 463 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 UBQLN2Q9UHD9 624 aa10.48□□□□□ -0.73
CACNA1C-224ENST00000465934 A0A0G2JRQ6 117 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 C3orf85A0A1B0GTC6 90 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 RAB3DO95716 219 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 MT-CO2P00403 227 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 AKR1C2P52895 323 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 TAS2R19P59542 299 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 STEAP1BQ6NZ63 245 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 CLVS1Q8IUQ0 354 aaPredicted RBP10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 TERB2Q8NHR7 220 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 MARCH1Q8TCQ1 289 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 PINX1Q96BK5 328 aaKnown RBP10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 ATP6V0BQ99437 205 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
CACNA1C-224ENST00000465934 IGHV3-49A0A0A0MS15 119 aa10.46□□□□□ -0.73
CACNA1C-224ENST00000465934 GABARAPH6UMI1 98 aa10.46□□□□□ -0.73
CACNA1C-224ENST00000465934 TSPAN4O14817 238 aa10.46□□□□□ -0.73
CACNA1C-224ENST00000465934 ST8SIA3O43173 380 aa10.46□□□□□ -0.73
CACNA1C-224ENST00000465934 TRIM16LQ309B1 348 aa10.46□□□□□ -0.73
CACNA1C-224ENST00000465934 ANKRD55Q3KP44 614 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms