RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 BATF3Q9NR55 127 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 ZNF355PQ9NSJ1 428 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 CCDC59Q9P031 241 aaKnown RBP3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 EXTL2Q9UBQ6 330 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 RSL24D1Q9UHA3 163 aaKnown RBP3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 VSIG4Q9Y279 399 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 S4R3C0 116 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
EXOSC3-204ENST00000465860 TRBV9A0A0B4J1U6 114 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 LINC01619G3V211 115 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 UPK2O00526 184 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 RGS5O15539 181 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 PGLYRP1O75594 196 aaPredicted RBP3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 SLC22A5O76082 557 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR2A4O95047 310 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 IGHV3-23P01764 117 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 LGALS1P09382 135 aaKnown RBP3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR9G9P0C7N8 305 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 RRASP10301 218 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 MT3P25713 68 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 TNFSF8P32971 234 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 LPAR6P43657 344 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 MFAP2P55001 183 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 TMEM267Q0VDI3 215 aaPredicted RBP3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 MSMO1Q15800 293 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 VMA21Q3ZAQ7 101 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 PHLDA2Q53GA4 152 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 IL34Q6ZMJ4 242 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 ADAMTSL5Q6ZMM2 481 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 TCTEX1D1Q8N7M0 179 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR5M8Q8NGP6 311 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR5H2Q8NGV7 314 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR4S2Q8NH73 311 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 MRAPQ8TCY5 172 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 URB1-AS1Q96HZ7 61 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 ZNF414Q96IQ9 312 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 OR2A7Q96R45 310 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 SOSTQ9BQB4 213 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 NXF2Q9GZY0 626 aaKnown RBP3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 SCPEP1Q9HB40 452 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 COA4Q9NYJ1 87 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 MTFP1Q9UDX5 166 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 NSG2Q9Y328 171 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 PRELID3BQ9Y3B1 194 aa3.65□□□□□ -1.83
EXOSC3-204ENST00000465860 A0A0G2JRQ6 117 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 TEX50A0A1B0GTY4 177 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 IGLC7A0M8Q6 106 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 MFSD2BA6NFX1 497 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SEC14L6B5MCN3 397 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 PPP5D1E7EU14 171 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 BMPR1BO00238 502 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 GPR31O00270 319 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RBFOX2O43251 390 aaKnown RBP eCLIP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 OR2J3O76001 311 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 HPRT1P00492 218 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 KRASP01116 189 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 HLA-AP01891 365 aaKnown RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 CD74P04233 296 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 F2RP25116 425 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SLC6A1P30531 599 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RCVRNP35243 200 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 G6PCP35575 357 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RPL27AP46776 148 aaKnown RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 PPP5CP53041 499 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 TAS2R46P59540 309 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 OR2B8PP59922 312 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 HERV-K104P61576 105 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RPL8P62917 257 aaKnown RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RHOGP84095 191 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 WT1-ASQ06250 92 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 CBX3Q13185 183 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 POU2AF1Q16633 256 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 VAX1Q5SQQ9 334 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 ZNF343Q6P1L6 599 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 TBC1D26Q86UD7 250 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 LHFPL1Q86WI0 220 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 MMD2Q8IY49 270 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 TTC9CQ8N5M4 171 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 OR4C16Q8NGL9 310 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 OR6F1Q8NGZ6 308 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 MARCH1Q8TCQ1 289 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 C15orf40Q8WUR7 153 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SMIM4Q8WVI0 70 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 DGCR14Q96DF8 476 aaKnown RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 DIRAS2Q96HU8 199 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SEC22AQ96IW7 307 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 TP53RKQ96S44 253 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 PHB2Q99623 299 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 C6orf62Q9GZU0 229 aaPredicted RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SEPSECSQ9HD40 501 aaKnown RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SLC2A9Q9NRM0 540 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 BET1LQ9NYM9 111 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RABL2AQ9UBK7 228 aaPredicted RBP3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 RABL2BQ9UNT1 228 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 SELENOKQ9Y6D0 94 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 V9GYH0 126 aa3.64□□□□□ -1.83
EXOSC3-204ENST00000465860 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 IGHV3-21A0A0B4J1V1 117 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 C13orf42A0A1B0GVH6 325 aa3.63□□□□□ -1.83
EXOSC3-204ENST00000465860 IZUMO1RA6ND01 250 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms