RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FAM181BA6NEQ2 426 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 HSBP1O75506 76 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 CELA3BP08861 270 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 HSPE1P61604 102 aaKnown RBP16.23■□□□□ 0.19
SDF4-205ENST00000465727 ABHD17BQ5VST6 288 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 FAM90A1Q86YD7 464 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 MUC15Q8N387 334 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 TMEM251Q8N6I4 163 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 OR8B3Q8NGG8 313 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 OR8B2Q96RD0 313 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 SAP30LQ9HAJ7 183 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 TMEM14BQ9NUH8 114 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 GGTLC3B5MD39 225 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 H0YJW9 148 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 ACTL6BO94805 426 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 SLAQ13239 276 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 FBLN7Q53RD9 439 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 CXorf67Q86X51 503 aaPredicted RBP16.23■□□□□ 0.19
SDF4-205ENST00000465727 OR4F17Q8NGA8 305 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 KLF14Q8TD94 323 aaPredicted RBP16.23■□□□□ 0.19
SDF4-205ENST00000465727 CT55Q8WUE5 264 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 SERTAD4Q9NUC0 356 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 ABI3Q9P2A4 366 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 PILRBQ9UKJ0 227 aa16.23■□□□□ 0.19
SDF4-205ENST00000465727 PCSK5Q92824 1860 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 MGST1P10620 155 aaKnown RBP16.22■□□□□ 0.19
SDF4-205ENST00000465727 LYG1Q8N1E2 194 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 DDB2Q92466 427 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 LOC105371242A0A075B767 164 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 C6orf15Q6UXA7 325 aaPredicted RBP16.22■□□□□ 0.19
SDF4-205ENST00000465727 FAM231DQ6ZW35 169 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 ZNF503Q96F45 646 aa16.22■□□□□ 0.19
SDF4-205ENST00000465727 OR7C2O60412 319 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 UBE2G1P62253 170 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 SPACA3Q8IXA5 215 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 ATOH7Q8N100 152 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 OR2V2Q96R30 315 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 HES7Q9BYE0 225 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 FAM234AQ9H0X4 552 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 GSX1Q9H4S2 264 aaPredicted RBP16.21■□□□□ 0.19
SDF4-205ENST00000465727 METRNQ9UJH8 293 aa16.21■□□□□ 0.19
SDF4-205ENST00000465727 DNAJC13O75165 2243 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 TRAV30A0A087WSZ9 112 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 A0A1W2PN81 502 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 M0R2Z0 102 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 MPV17P39210 176 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 RPS20P60866 119 aaKnown RBP16.2■□□□□ 0.18
SDF4-205ENST00000465727 TNXAQ16473 311 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 LTC4SQ16873 150 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 CR1LQ2VPA4 569 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 FAM162BQ5T6X4 162 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 FAM214BQ7L5A3 538 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 OR4C5Q8NGB2 326 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 IFI27L2Q9H2X8 130 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 OR2J3O76001 311 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 ATP5IP56385 69 aaPredicted RBP16.2■□□□□ 0.18
SDF4-205ENST00000465727 C3AR1Q16581 482 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 MAJINQ3KP22 176 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 RPL39P5Q59GN2 51 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 LCN12Q6JVE5 192 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 GCM1Q9NP62 436 aa16.2■□□□□ 0.18
SDF4-205ENST00000465727 IGLL1P15814 213 aa16.19■□□□□ 0.18
SDF4-205ENST00000465727 MBD6Q96DN6 1003 aa16.19■□□□□ 0.18
SDF4-205ENST00000465727 CHRDL1Q9BU40 450 aa16.19■□□□□ 0.18
SDF4-205ENST00000465727 F2RL2O00254 374 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 TFF1P04155 84 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 EDDM3AQ14507 147 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 LRRC10Q5BKY1 277 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 PMS2CLQ68D20 193 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 EBLN2Q6P2I7 272 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 INO80CQ6PI98 192 aaPredicted RBP16.18■□□□□ 0.18
SDF4-205ENST00000465727 TRIB1Q96RU8 372 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 DCTN5Q9BTE1 182 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 MRPL32Q9BYC8 188 aaKnown RBP16.18■□□□□ 0.18
SDF4-205ENST00000465727 C2orf70A6NJV1 201 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 AHRRA9YTQ3 701 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 C8orf88P0DMB2 117 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 Q56UQ5 140 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 OR4A47Q6IF82 309 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 CD177Q8N6Q3 437 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.18■□□□□ 0.18
SDF4-205ENST00000465727 PPP1R35Q8TAP8 253 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 GRAMD2BQ96HH9 432 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 C1RLQ9NZP8 487 aa16.18■□□□□ 0.18
SDF4-205ENST00000465727 C19orf67A6NJJ6 358 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 PPBPP02775 128 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 PRDX2P32119 198 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 LOXL3P58215 753 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 ATP5L2Q7Z4Y8 100 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 ST20Q9HBF5 79 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 TNFRSF19Q9NS68 423 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 ZNF257Q9Y2Q1 563 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 MFAP2P55001 183 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 POU2AF1Q16633 256 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 PRNDQ9UKY0 176 aa16.17■□□□□ 0.18
SDF4-205ENST00000465727 MGST3O14880 152 aa16.16■□□□□ 0.18
SDF4-205ENST00000465727 CRXO43186 299 aaPredicted RBP16.16■□□□□ 0.18
SDF4-205ENST00000465727 ARG2P78540 354 aa16.16■□□□□ 0.18
SDF4-205ENST00000465727 RHOGP84095 191 aa16.16■□□□□ 0.18
SDF4-205ENST00000465727 HOXA4Q00056 320 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms