RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 SMIM8Q96KF7 97 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 HYLS1Q96M11 299 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 PRSS22Q9GZN4 317 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 CACFD1Q9UGQ2 172 aa13.55□□□□□ -0.24
PTPRU-206ENST00000465525 ARPC5O15511 151 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 IFNA10P01566 189 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 SLC25A4P12235 298 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 LYL1P12980 280 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 RPL23AP62750 156 aaKnown RBP13.54□□□□□ -0.24
PTPRU-206ENST00000465525 ZNF546Q86UE3 836 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 OR2C3Q8N628 320 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 SGMS2Q8NHU3 365 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 JMJD1CQ15652 2540 aa13.54□□□□□ -0.24
PTPRU-206ENST00000465525 IGSF23A1L1A6 192 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 PRH1P02810 166 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 SNCAP37840 140 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 AP2S1P53680 142 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 ERHP84090 104 aaKnown RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 SLC24A4Q8NFF2 622 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 TMEM170AQ8WVE7 144 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 CIB3Q96Q77 187 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 METTL15P1P0C7V9 234 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 RNASE2P10153 161 aaKnown RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 BSCL2Q96G97 398 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 P2RX4Q99571 388 aa13.53□□□□□ -0.24
PTPRU-206ENST00000465525 LYRM2Q9NU23 88 aaPredicted RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 STRAPQ9Y3F4 350 aaKnown RBP13.53□□□□□ -0.24
PTPRU-206ENST00000465525 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 RGS13O14921 159 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 CST7O76096 145 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 NPY1RP25929 384 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 P2RY1P47900 373 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 MFAP2P55001 183 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 TNFSF18Q9UNG2 199 aa13.52□□□□□ -0.25
PTPRU-206ENST00000465525 AP4M1O00189 453 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 TSC22D2O75157 780 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 HKR1P10072 659 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 RPL12P30050 165 aaKnown RBP13.51□□□□□ -0.25
PTPRU-206ENST00000465525 TAS2R30P59541 319 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 DEFA5Q01523 94 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 OR8G2PQ6IF36 304 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 Q6ZSV7 163 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 MRPL41Q8IXM3 137 aaKnown RBP13.51□□□□□ -0.25
PTPRU-206ENST00000465525 TMEM252Q8N6L7 170 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 ZC4H2Q9NQZ6 224 aa13.51□□□□□ -0.25
PTPRU-206ENST00000465525 INS-IGF2F8WCM5 200 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 TSPAN9O75954 239 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 IGF1P05019 195 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 HTR2BP41595 481 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 NHLH2Q02577 135 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 HAPLN4Q86UW8 402 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 TMEM217Q8N7C4 229 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 SRSF8Q9BRL6 282 aaKnown RBP13.5□□□□□ -0.25
PTPRU-206ENST00000465525 WNT10AQ9GZT5 417 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 SLA2Q9H6Q3 261 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 DMRT1Q9Y5R6 373 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 U3KQ87 197 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 SOX15O60248 233 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 FBXO24O75426 580 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 OR8U8P0C7N1 319 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 DEFA4P12838 97 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 CTRB1P17538 263 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 CXCL2P19875 107 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 IFITM2Q01629 132 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 EWSR1Q01844 656 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPRU-206ENST00000465525 ARL16Q0P5N6 197 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 BSXQ3C1V8 233 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 C19orf54Q5BKX5 351 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 CTRB2Q6GPI1 263 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 TMEM65Q6PI78 240 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 TMEM14EPQ6UXP3 125 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 HSD17B13Q7Z5P4 300 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-206ENST00000465525 Q8N2B8 174 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 STPG2Q8N412 459 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 TTC9CQ8N5M4 171 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 INO80EQ8NBZ0 244 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-206ENST00000465525 MFFQ9GZY8 342 aa13.5□□□□□ -0.25
PTPRU-206ENST00000465525 F11RQ9Y624 299 aaKnown RBP13.5□□□□□ -0.25
PTPRU-206ENST00000465525 NPIPB5A8MRT5 1133 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 IFNA4P05014 189 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 NUP62P37198 522 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-206ENST00000465525 RPP30P78346 268 aaKnown RBP13.49□□□□□ -0.25
PTPRU-206ENST00000465525 NDUFA5Q16718 116 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 SLC25A24Q6NUK1 477 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 C10orf99Q6UWK7 81 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 FAM110DQ8TAY7 271 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-206ENST00000465525 MISP3Q96FF7 219 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 GON7Q9BXV9 100 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 SMIM3Q9BZL3 60 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 ZNF355PQ9NSJ1 428 aa13.49□□□□□ -0.25
PTPRU-206ENST00000465525 IGHV3-21A0A0B4J1V1 117 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 HMSDA8MTL9 139 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 NDUFA7O95182 113 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
PTPRU-206ENST00000465525 CRIP2P52943 208 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms