RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CCL15Q16663 113 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TBC1D28Q2M2D7 210 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 KHDC3LQ587J8 217 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 FAM162BQ5T6X4 162 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TMEM236Q5W0B7 351 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 GLT8D1Q68CQ7 371 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 XAF1Q6GPH4 301 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 ALKAL2Q6UX46 152 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC35E3Q7Z769 313 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 LRP11Q86VZ4 500 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF101Q8IZC7 436 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 DEFB107AQ8IZN7 70 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 KRTCAP2Q8N6L1 136 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TMEM105Q8N8V8 129 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 FER1L6-AS1Q8NA97 138 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 ST20-AS1Q8NBB2 130 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 APCDD1LQ8NCL9 501 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 OR4B1Q8NGF8 309 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 OR51T1Q8NGJ9 327 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNRF2Q8NHG8 242 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 BAALCQ8WXS3 180 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TMEM106AQ96A25 262 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 DIRAS2Q96HU8 199 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 UBE2E2Q96LR5 201 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 CCDC115Q96NT0 180 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TSPAN32Q96QS1 320 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 GPR22Q99680 433 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 DERL1Q9BUN8 251 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 C20orf27Q9GZN8 174 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 CHRNA10Q9GZZ6 450 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 OR2D2Q9H210 308 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 OTOFQ9HC10 1997 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 HES4Q9HCC6 221 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 GPR84Q9NQS5 396 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 UQCC1Q9NVA1 299 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 UQCR10Q9UDW1 63 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 MARCOQ9UEW3 520 aaPredicted RBP2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC23A2Q9UGH3 650 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 BOKQ9UMX3 212 aaPredicted RBP2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 TNFSF18Q9UNG2 199 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 CYSLTR1Q9Y271 337 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 LAMTOR2Q9Y2Q5 125 aa2.04□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF638Q14966 1978 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 CDK5RAP2Q96SN8 1893 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MYO5CQ9NQX4 1742 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 WIZO95785 1651 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 HECW1Q76N89 1606 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MROH1Q8NDA8 1641 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MAST1Q9Y2H9 1570 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 ATP7AQ04656 1500 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 ARHGAP5Q13017 1502 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 COL1A2P08123 1366 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 ROBO3Q96MS0 1386 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TRAV36DV7A0A075B6V5 113 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 IGHV1-69-2A0A0G2JMI3 117 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 A0A1B0GV50 99 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TINCRA0A1B0GVN0 87 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 DAPL1A0PJW8 107 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 FAM159BA6NKW6 160 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 A8MUU9 505 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 LGALS9O00182 355 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MFNGO00587 321 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 LYRM1O43325 122 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC37A4O43826 429 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 DHRS3O75911 302 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 CFDP00746 253 aaPredicted RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MAS1P04201 325 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 MMP7P09237 267 aaPredicted RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 LIMS3P0CW19 117 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 LIMS4P0CW20 117 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 NFYBP25208 207 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 PSMB9P28065 219 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 RPL12P30050 165 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 GABRA3P34903 492 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 POLR2HP52434 150 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 PPP1CAP62136 330 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 RPS25P62851 125 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 RPS28P62857 69 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 SLC35A1P78382 337 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 PSG4Q00888 419 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 HIST1H1AQ02539 215 aaPredicted RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 FUT5Q11128 374 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 PRDX4Q13162 271 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TAL2Q16559 108 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 CCSMST1Q4G0I0 132 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 KRTAP13-2Q52LG2 175 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TRMT12Q53H54 448 aaKnown RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 OR10J3Q5JRS4 329 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 ACTL10Q5JWF8 245 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TEX36Q5VZQ5 186 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 TNFAIP8L2Q6P589 184 aaPredicted RBP2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 GKN2Q86XP6 184 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 ZNF567Q8N184 647 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 LINC00301Q8NCQ3 95 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 PLPP5Q8NEB5 264 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 GPR32P1Q8NGA4 272 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 OR51A2Q8NGJ7 313 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 OR5D16Q8NGK9 328 aa2.03□□□□□ -2.08
HMGXB4-205ENST00000464480 OR2T35Q8NGX2 323 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms