RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 FLVCR2Q9UPI3 526 aa11.85□□□□□ -0.51
RAB11FIP3-208ENST00000464263 ANXA3P12429 323 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 MFAP2P55001 183 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 LYZL2Q7Z4W2 148 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 LGI3Q8N145 548 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 OR2C3Q8N628 320 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 RNASE11Q8TAA1 199 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 F11RQ9Y624 299 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-208ENST00000464263 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 A0A0B4J2A0 478 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 INS-IGF2F8WCM5 200 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 LYRM1O43325 122 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SFT2D2O95562 160 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 HOXD3P31249 432 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 MECP2P51608 486 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PPP1R1AQ13522 171 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ZNF846Q147U1 533 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 WDR12Q9GZL7 423 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SHPKQ9UHJ6 478 aa11.83□□□□□ -0.52
RAB11FIP3-208ENST00000464263 OVOL1O14753 267 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 WIPF1O43516 503 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 IFNA17P01571 189 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ZP3P21754 424 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 VAMP1P23763 118 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 UBE2MP61081 183 aaKnown RBP11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SRPXP78539 464 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 DEFA6Q01524 100 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 KLF5Q13887 457 aaPredicted RBP11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SPINK9Q5DT21 86 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 NMSQ5H8A3 153 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 LRTM2Q8N967 370 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PLEKHA3Q9HB20 300 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 THYN1Q9P016 225 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 NOTCH1P46531 2555 aa11.82□□□□□ -0.52
RAB11FIP3-208ENST00000464263 C9orf170A2RU37 121 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 BMPR1BO00238 502 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CYB5BO43169 146 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SPCS3P61009 180 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ERHP84090 104 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PDLIM3Q53GG5 364 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 FAM209BQ5JX69 171 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 EEF1AKMT3Q96AZ1 226 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CXorf58Q96LI9 332 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CCDC140Q96MF4 163 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PDCD10Q9BUL8 212 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 GPR61Q9BZJ8 451 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 TBC1D24Q9ULP9 559 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 S4R3C0 116 aa11.81□□□□□ -0.52
RAB11FIP3-208ENST00000464263 TRBV7-1A0A0A6YYK4 115 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PIGBOS1A0A0B4J2F0 54 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 DUXBA0A1W2PPF3 345 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SEC14L6B5MCN3 397 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 UPK1BO75841 260 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 KRTAP10-11P60412 298 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 IFITM3Q01628 133 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 EGFEM1PQ0D2K5 195 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 C9orf66Q5T8R8 295 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ACSM6Q6P461 480 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CLEC19AQ6UXS0 136 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ZNF502Q8TBZ5 544 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 VN1R17PQ8TDU5 208 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 DNAH3Q8TD57 4116 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 MEGF8Q7Z7M0 2845 aa11.8□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 K7EIM0 57 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 TCRBP04435 133 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 OR4E1P0C645 316 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SULT1A3P0DMM9 295 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SULT1A4P0DMN0 295 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 ASAH1Q13510 395 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
RAB11FIP3-208ENST00000464263 A0A1B0GU03 582 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 GGCTO75223 188 aaKnown RBP11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 PITX3O75364 302 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CLEC3BP05452 202 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SYNJ2BPP57105 145 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SMCO1Q147U7 214 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 RPEL1Q2QD12 228 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 BSXQ3C1V8 233 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 LYG2Q86SG7 212 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 C20orf85Q9H1P6 137 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 CACFD1Q9UGQ2 172 aa11.78□□□□□ -0.52
RAB11FIP3-208ENST00000464263 IGHV3-21A0A0B4J1V1 117 aa11.77□□□□□ -0.53
RAB11FIP3-208ENST00000464263 I3L2K1 104 aa11.77□□□□□ -0.53
RAB11FIP3-208ENST00000464263 OR2C1O95371 312 aa11.77□□□□□ -0.53
RAB11FIP3-208ENST00000464263 HLA-AP01891 365 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms