RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OR2C3Q8N628 320 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 IL22RA2Q969J5 263 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 GPR146Q96CH1 333 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 GPR61Q9BZJ8 451 aa13.54□□□□□ -0.24
VPS52-214ENST00000463486 AURKAIP1Q9NWT8 199 aaPredicted RBP13.54□□□□□ -0.24
VPS52-214ENST00000463486 F11RQ9Y624 299 aaKnown RBP13.54□□□□□ -0.24
VPS52-214ENST00000463486 MFSD2BA6NFX1 497 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 INS-IGF2F8WCM5 200 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 DEFA4P12838 97 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 ZP3P21754 424 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
VPS52-214ENST00000463486 C9orf66Q5T8R8 295 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 TMEM268Q5VZI3 342 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 FAM219AQ8IW50 185 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 KCNIP3Q9Y2W7 256 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 S4R3C0 116 aa13.53□□□□□ -0.24
VPS52-214ENST00000463486 NAP1L6A6NFF2 107 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 IGHV3-23P01764 117 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 TMEM128Q5BJH2 165 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 PVRIGQ6DKI7 326 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 SLC35G3Q8N808 338 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 ZNF114Q8NC26 417 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 ZNF502Q8TBZ5 544 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 RRNAD1Q96FB5 475 aaKnown RBP13.52□□□□□ -0.25
VPS52-214ENST00000463486 BATF3Q9NR55 127 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
VPS52-214ENST00000463486 LINC00854A0A1B0GVQ3 168 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 PPP5D1E7EU14 171 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 K7EIM0 57 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 NDUFB6O95139 128 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 ANKRD55Q3KP44 614 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 SPINK9Q5DT21 86 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 LYZL2Q7Z4W2 148 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 TMED4Q7Z7H5 227 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 OR1P1Q8NH06 330 aa13.51□□□□□ -0.25
VPS52-214ENST00000463486 A0A0B4J2A0 478 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 WI2-2373I1.2A0A1W2PRP0 233 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
VPS52-214ENST00000463486 HLA-AP01891 365 aaKnown RBP13.5□□□□□ -0.25
VPS52-214ENST00000463486 INSL3P51460 131 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 SYNJ2BPP57105 145 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 RBMS2Q15434 407 aaKnown RBP13.5□□□□□ -0.25
VPS52-214ENST00000463486 SLC25A24Q6NUK1 477 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 CLEC19AQ6UXS0 136 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 OR52E5Q8NH55 327 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 VN1R17PQ8TDU5 208 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 EEF1AKMT3Q96AZ1 226 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 CXorf58Q96LI9 332 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 C7orf50Q9BRJ6 194 aaKnown RBP13.5□□□□□ -0.25
VPS52-214ENST00000463486 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.5□□□□□ -0.25
VPS52-214ENST00000463486 SHPKQ9UHJ6 478 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 FLVCR2Q9UPI3 526 aa13.5□□□□□ -0.25
VPS52-214ENST00000463486 TRBV7-1A0A0A6YYK4 115 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 K7EIL1 84 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 CLEC3BP05452 202 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 INPP1P49441 399 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 PPP1R1AQ13522 171 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 BSXQ3C1V8 233 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 FAM209BQ5JX69 171 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 ADAMTSL5Q6ZMM2 481 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 REC114Q7Z4M0 266 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 OR9G4Q8NGQ1 327 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 CCDC32Q9BV29 185 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 PLEKHA3Q9HB20 300 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 CACNG5Q9UF02 275 aa13.49□□□□□ -0.25
VPS52-214ENST00000463486 SORL1Q92673 2214 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 I3L2K1 104 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 OR2C1O95371 312 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 SFT2D2O95562 160 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 MECP2P51608 486 aaKnown RBP13.48□□□□□ -0.25
VPS52-214ENST00000463486 RPEL1Q2QD12 228 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 LGI3Q8N145 548 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 CENPSQ8N2Z9 138 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 ZNF414Q96IQ9 312 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 THYN1Q9P016 225 aa13.48□□□□□ -0.25
VPS52-214ENST00000463486 IGHV3-21A0A0B4J1V1 117 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 GGCTO75223 188 aaKnown RBP13.47□□□□□ -0.25
VPS52-214ENST00000463486 SAP30O75446 220 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 IFNA17P01571 189 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 CSN3P07498 182 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 ANXA3P12429 323 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 SPCS3P61009 180 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 UBE2MP61081 183 aaKnown RBP13.47□□□□□ -0.25
VPS52-214ENST00000463486 GPHB5Q86YW7 130 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 S100ZQ8WXG8 99 aa13.47□□□□□ -0.25
VPS52-214ENST00000463486 CENPXA8MT69 81 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 LYRM1O43325 122 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 PITX3O75364 302 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 IGLV1-51P01701 117 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 RNASE2P10153 161 aaKnown RBP13.46□□□□□ -0.25
VPS52-214ENST00000463486 ARL3P36405 182 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 SRPXP78539 464 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 ERHP84090 104 aaKnown RBP13.46□□□□□ -0.25
VPS52-214ENST00000463486 C11orf87Q6NUJ2 197 aa13.46□□□□□ -0.25
VPS52-214ENST00000463486 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms