RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 TROQ12816 1431 aaPredicted RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 MAGI1Q96QZ7 1491 aaPredicted RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 FAM236DA0A1B0GTK5 79 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 OR11H12B2RN74 326 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 C9JCJ5 164 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 CLDN25C9JDP6 229 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 BHLHE40O14503 412 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 HAND1O96004 215 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 APOC1P02654 83 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 FAM236CP0DP71 79 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 CD79AP11912 226 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 SLC25A16P16260 332 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 HIST1H1TP22492 207 aaPredicted RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 CRHBPP24387 322 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 SERPINB9P50453 376 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 AKR1C2P52895 323 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 AQP4P55087 323 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 BTN3A2P78410 334 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 PSG4Q00888 419 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 BAMBIQ13145 260 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 CDK10Q15131 360 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ALX1Q15699 326 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 GUK1Q16774 197 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 C5orf46Q6UWT4 87 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 LINC00299Q6ZSB3 139 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 C2orf91Q6ZV80 131 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ZNF767PQ75MW2 155 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 OR5H6Q8NGV6 325 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 OR11H2Q8NH07 326 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 OR10A6Q8NH74 314 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 FNDC9Q8TBE3 224 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 C12orf43Q96C57 262 aaKnown RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 ISOC1Q96CN7 298 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 DCUN1D1Q96GG9 259 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 TTTY13Q9BZ97 58 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ULBP3Q9BZM4 244 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 NKX6-2Q9C056 277 aaPredicted RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 MRPL27Q9P0M9 148 aaKnown RBP2.1□□□□□ -2.07
USH2A-203ENST00000463147 TAAR3PQ9P1P4 343 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 MYH1P12882 1939 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 MYH2Q9UKX2 1941 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ATP7AQ04656 1500 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 HMGXB3Q12766 1538 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 ZNF532Q9HCE3 1301 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 CDC42BPGQ6DT37 1551 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 SLX4Q8IY92 1834 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 KIF20BQ96Q89 1820 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 WNK3Q9BYP7 1800 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 MED23Q9ULK4 1368 aa2.1□□□□□ -2.07
USH2A-203ENST00000463147 MADDQ8WXG6 1647 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 DCCP43146 1447 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 PREX1Q8TCU6 1659 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 QRICH2Q9H0J4 1663 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 MLH3Q9UHC1 1453 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 ITSN1Q15811 1721 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 ANKRD26Q9UPS8 1709 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 CRYBG1Q9Y4K1 1723 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 N4BP2Q86UW6 1770 aaPredicted RBP2.09□□□□□ -2.07
USH2A-203ENST00000463147 TOPBP1Q92547 1522 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 A0A087WUU8 490 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 A0A0G2JND7 137 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 A0A1W2PNM2 257 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 C2orf74A8MZ97 194 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 H0YJX3 145 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 J3QRK9 145 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 PLA2G10O15496 165 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 RNASE2P10153 161 aaKnown RBP2.09□□□□□ -2.07
USH2A-203ENST00000463147 COL8A2P25067 703 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 ATP6V0CP27449 155 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 MAGEA12P43365 314 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 GNG10P50151 68 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 TMBIM6P55061 237 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 DEFA1P59665 94 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 DEFA3P59666 94 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 CAV1Q03135 178 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 LPCAT3Q6P1A2 487 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 AMTNQ6UX39 209 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 CTAGE3PQ8IX95 158 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 TBC1D19Q8N5T2 526 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 SERPINI1Q99574 410 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 KIFC1Q9BW19 673 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 ABCG5Q9H222 651 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 DCSTAMPQ9H295 470 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 FBXO5Q9UKT4 447 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 MMACHCQ9Y4U1 282 aa2.09□□□□□ -2.07
USH2A-203ENST00000463147 SAMD9LQ8IVG5 1584 aa2.09□□□□□ -2.08
USH2A-203ENST00000463147 MYH11P35749 1972 aa2.09□□□□□ -2.08
USH2A-203ENST00000463147 IGHV1-69-2A0A0G2JMI3 117 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 EFCAB10A6NFE3 127 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 E5RI56 91 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 F8W036 122 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 AKR1D1P51857 326 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 RPS20P60866 119 aaKnown RBP2.08□□□□□ -2.08
USH2A-203ENST00000463147 ARF6P62330 175 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 TBPL1P62380 186 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 HOXC5Q00444 222 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 GNA12Q03113 381 aa2.08□□□□□ -2.08
USH2A-203ENST00000463147 FABP9Q0Z7S8 132 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms