RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 C11orf52Q96A22 123 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 C1orf159Q96HA4 380 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 CCL13Q99616 98 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 NDUFAF3Q9BU61 184 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 PRO1933Q9H354 126 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM106BQ9NUM4 274 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 LY96Q9Y6Y9 160 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 ARL2-SNX15V9GYD0 113 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 RRHO14718 337 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-204ENST00000461897 CCL17Q92583 94 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 GNG12Q9UBI6 72 aa10.17□□□□□ -0.78
COL4A6-204ENST00000461897 TRBV20OR9-2A0A075B6H5 130 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 ARL14EPLP0DKL9 152 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 IQCJQ1A5X6 159 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 CST9LP1Q5W188 147 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 DERL1Q9BUN8 251 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 NPVFQ9HCQ7 196 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 HEYLQ9NQ87 328 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-204ENST00000461897 TMEM140Q9NV12 185 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 TCF19Q9Y242 345 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 CACNA1BQ00975 2339 aa10.16□□□□□ -0.78
COL4A6-204ENST00000461897 C15orf61A6NNL5 157 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 C9JCJ5 164 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 M0R1X1 148 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 SLC31A2O15432 143 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 AREGP15514 252 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 RAB7AP51149 207 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 TAS2R60P59551 318 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 UBE2G2P60604 165 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 SELENOTP62341 195 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 POU2AF1Q16633 256 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 CLEC12BQ2HXU8 276 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 TCF23Q7RTU1 214 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 S1PR3Q99500 378 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 FAM234AQ9H0X4 552 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 PATZ1Q9HBE1 687 aaKnown RBP10.15□□□□□ -0.78
COL4A6-204ENST00000461897 RAB9BQ9NP90 201 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 FOXA2Q9Y261 457 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-204ENST00000461897 TRAPPC1Q9Y5R8 145 aa10.15□□□□□ -0.78
COL4A6-204ENST00000461897 PPIAL4EA0A075B759 164 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 A0A0U1RQK1 487 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 MDFIC2A0A1B0GVS7 189 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 ZNF320A2RRD8 509 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 PPIAL4DF5H284 164 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 FCN3O75636 299 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 PPIAL4FP0DN26 164 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 RPL29P47914 159 aaKnown RBP10.15□□□□□ -0.79
COL4A6-204ENST00000461897 ZNF134P52741 427 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 MIC13Q5XKP0 118 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 TEX38Q6PEX7 206 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 OR4S2Q8NH73 311 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 SGMS2Q8NHU3 365 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 PPIAL4AQ9Y536 164 aa10.15□□□□□ -0.79
COL4A6-204ENST00000461897 COL12A1Q99715 3063 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 TRAV3A0A0B4J244 114 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 IGHV1-69-2A0A0G2JMI3 117 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 NKX6-3A6NJ46 265 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 TNFRSF13BO14836 293 aaPredicted RBP10.14□□□□□ -0.79
COL4A6-204ENST00000461897 ESDP10768 282 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 GCHFRP30047 84 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 RAB4BP61018 213 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 PRSS8Q16651 343 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 LTC4SQ16873 150 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 RPL39P5Q59GN2 51 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 CALYQ9NYX4 217 aa10.14□□□□□ -0.79
COL4A6-204ENST00000461897 TRGV10A0A0A0MS01 117 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 SCO2A0A1W2PP80 73 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 A0A1W2PPR1 153 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 C19orf84I3L1E1 186 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 IL6RP08887 468 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PPOXP50336 477 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 HSPE1P61604 102 aaKnown RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 RHOBP62745 196 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PRR20EP86478 221 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PRR20CP86479 221 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PRR20DP86480 221 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PRR20BP86481 221 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 PRR20AP86496 221 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 SSX2Q16385 188 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 ARSJQ5FYB0 599 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 OR10G8Q8NGN5 311 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 SLC25A10Q9UBX3 287 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 TET2Q6N021 2002 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 A0A1B0GV90 55 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 MT-CO2P00403 227 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 THBS3P49746 956 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 UTF1Q5T230 341 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 C11orf71Q6IPW1 123 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 MRPL41Q8IXM3 137 aaKnown RBP10.13□□□□□ -0.79
COL4A6-204ENST00000461897 ABHD12Q8N2K0 398 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 OCC1Q8TAD7 63 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 CORO2AQ92828 525 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 ADTRPQ96IZ2 230 aa10.13□□□□□ -0.79
COL4A6-204ENST00000461897 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms