RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MLXQ9UH92 298 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 PRNDQ9UKY0 176 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 UFC1Q9Y3C8 167 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 OR51B2Q9Y5P1 312 aa6.87□□□□□ -1.31
BRCA1-207ENST00000461798 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 K7EMT4 169 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 HPGDSO60760 199 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 S100GP29377 79 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 GPR183P32249 361 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 G6PCP35575 357 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 TSPAN5P62079 268 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 CTF1Q16619 201 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 SLC25A24Q6NUK1 477 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 SLC38A6Q8IZM9 456 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 SCARB1Q8WTV0 552 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 BSCL2Q96G97 398 aaPredicted RBP6.86□□□□□ -1.31
BRCA1-207ENST00000461798 SEC22AQ96IW7 307 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 TMEM56Q96MV1 263 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 C5orf66Q9H5L9 145 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 TMEM14BQ9NUH8 114 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 NSG2Q9Y328 171 aa6.86□□□□□ -1.31
BRCA1-207ENST00000461798 DBX1A6NMT0 343 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 C15orf61A6NNL5 157 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-207ENST00000461798 K7EIM0 57 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 NDUFA4O00483 81 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 GABARAPO95166 117 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 IGKV1-39P01597 117 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 IGKV1D-39P04432 117 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF182P17025 639 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-207ENST00000461798 FCGR2BP31994 310 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-207ENST00000461798 RND3P61587 244 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 PHLDA2Q53GA4 152 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 MZT2AQ6P582 158 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 TBC1D26Q86UD7 250 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 LHFPL1Q86WI0 220 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 SNX29P2Q8IUI4 249 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 OR2C3Q8N628 320 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 OR52B4Q8NGK2 314 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 OR1P1Q8NH06 330 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 C15orf40Q8WUR7 153 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 AP3S1Q92572 193 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF486Q96H40 463 aaPredicted RBP6.85□□□□□ -1.31
BRCA1-207ENST00000461798 SRD5A3Q9H8P0 318 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 GAR1Q9NY12 217 aaKnown RBP6.85□□□□□ -1.31
BRCA1-207ENST00000461798 C21orf62Q9NYP8 219 aa6.85□□□□□ -1.31
BRCA1-207ENST00000461798 LCE6AA0A183 80 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 TSPAN4O14817 238 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 CTSGP08311 255 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 TBPP20226 339 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 ADMP35318 185 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 HSPE1P61604 102 aaKnown RBP6.84□□□□□ -1.31
BRCA1-207ENST00000461798 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 RBPMS2Q6ZRY4 209 aaKnown RBP6.84□□□□□ -1.31
BRCA1-207ENST00000461798 ARRDC1Q8N5I2 433 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF114Q8NC26 417 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 IL17DQ8TAD2 202 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 ZNF414Q96IQ9 312 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 TXN2Q99757 166 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 SPAG8Q99932 426 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-207ENST00000461798 CHRDL1Q9BU40 450 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 HINT2Q9BX68 163 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 WFDC10AQ9H1F0 79 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 DAZ1Q9NQZ3 744 aaKnown RBP6.84□□□□□ -1.31
BRCA1-207ENST00000461798 MTFP1Q9UDX5 166 aa6.84□□□□□ -1.31
BRCA1-207ENST00000461798 IGHV3-35A0A0C4DH35 117 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 OR2T8A6NH00 312 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 C15orf62A8K5M9 175 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 INS-IGF2F8WCM5 200 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 I3L2K1 104 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 SCAF4O95104 1147 aaKnown RBP6.83□□□□□ -1.32
BRCA1-207ENST00000461798 SMIM18P0DKX4 95 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 PRCDQ00LT1 54 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 PVRIGQ6DKI7 326 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 ZFAND6Q6FIF0 208 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 LAMTOR1Q6IAA8 161 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 H2BFWTQ7Z2G1 175 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 OR52I2Q8NH67 350 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 OR4A16Q8NH70 328 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 ABHD1Q96SE0 405 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 FAM110AQ9BQ89 295 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 NAA50Q9GZZ1 169 aaKnown RBP6.83□□□□□ -1.32
BRCA1-207ENST00000461798 RETNQ9HD89 108 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 KLK11Q9UBX7 282 aa6.83□□□□□ -1.32
BRCA1-207ENST00000461798 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
BRCA1-207ENST00000461798 IGHV3-21A0A0B4J1V1 117 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 FAM25AB3EWG3 89 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 FAM25CB3EWG5 89 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 FAM25GB3EWG6 89 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 M0QYG6 137 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 IGKV1-5P01602 117 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 CD74P04233 296 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 CD3DP04234 171 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 P0C879 139 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 ALDH3B2P48448 385 aa6.82□□□□□ -1.32
BRCA1-207ENST00000461798 MFAP4P55083 255 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms