RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 OR8B2Q96RD0 313 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 CST9LQ9H4G1 147 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 LAMA5O15230 3695 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 IZUMO1RA6ND01 250 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 DEFB108AA8MXU0 73 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 ACTL6BO94805 426 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 MGST1P10620 155 aaKnown RBP12.78□□□□□ -0.36
SSR4-206ENST00000460616 SRSF6Q13247 344 aaKnown RBP12.78□□□□□ -0.36
SSR4-206ENST00000460616 RAB31Q13636 194 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 OCIAD2Q56VL3 154 aa12.78□□□□□ -0.36
SSR4-206ENST00000460616 CFAP47Q6ZTR5 3102 aa12.77□□□□□ -0.36
SSR4-206ENST00000460616 ZNF891A8MT65 544 aaPredicted RBP12.77□□□□□ -0.37
SSR4-206ENST00000460616 FCGR3BO75015 233 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 OTX2P32243 289 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 UBE2G1P62253 170 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 FOXF2Q12947 444 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 SLC35E4Q6ICL7 350 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 MIR17HGQ75NE6 70 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 CEP295Q9C0D2 2601 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 GRPP07492 148 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 MPV17L2Q567V2 206 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 SPACA3Q8IXA5 215 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 VKORC1L1Q8N0U8 176 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 OR52E5Q8NH55 327 aa12.77□□□□□ -0.37
SSR4-206ENST00000460616 LOC400499M0QZD8 3231 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
SSR4-206ENST00000460616 RPS20P60866 119 aaKnown RBP12.76□□□□□ -0.37
SSR4-206ENST00000460616 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 FAM122AQ96E09 287 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 SCNM1Q9BWG6 230 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 TMEM167BQ9NRX6 74 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 TECRQ9NZ01 308 aaKnown RBP12.76□□□□□ -0.37
SSR4-206ENST00000460616 ARL2-SNX15V9GYD0 113 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 FOLR3P41439 243 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 BPIFB3P59826 476 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 NUDT10Q8NFP7 164 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
SSR4-206ENST00000460616 C2orf70A6NJV1 201 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 IGLV2-8P01709 118 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 PSG1P11464 419 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 SSTR5P35346 364 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 CORO2AQ92828 525 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 NEUROG1Q92886 237 aa12.75□□□□□ -0.37
SSR4-206ENST00000460616 PINLYPA6NC86 204 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 TAX1BP3O14907 124 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 DUTP33316 252 aaKnown RBP12.74□□□□□ -0.37
SSR4-206ENST00000460616 OR4A47Q6IF82 309 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 RNASEKQ6P5S7 137 aaKnown RBP12.74□□□□□ -0.37
SSR4-206ENST00000460616 FAM168AQ92567 244 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 COQ2Q96H96 371 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 TNFRSF19Q9NS68 423 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 SLC25A10Q9UBX3 287 aaPredicted RBP12.74□□□□□ -0.37
SSR4-206ENST00000460616 WASHC3Q9Y3C0 194 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 AHRRA9YTQ3 701 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 PPOXP50336 477 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 FAM214BQ7L5A3 538 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 ZNF596Q8TC21 504 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 DOCK10Q96BY6 2186 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 NCKAP5O14513 1909 aa12.74□□□□□ -0.37
SSR4-206ENST00000460616 GPR12P47775 334 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 ERVK-16P61578 105 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PRR20EP86478 221 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PRR20CP86479 221 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PRR20DP86480 221 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PRR20BP86481 221 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PRR20AP86496 221 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 KLF5Q13887 457 aaPredicted RBP12.73□□□□□ -0.37
SSR4-206ENST00000460616 RASL11AQ6T310 242 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PPP1R32Q7Z5V6 425 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 WIPF2Q8TF74 440 aaPredicted RBP12.73□□□□□ -0.37
SSR4-206ENST00000460616 SSBP3Q9BWW4 388 aaPredicted RBP12.73□□□□□ -0.37
SSR4-206ENST00000460616 FAM234AQ9H0X4 552 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 CLCF1Q9UBD9 225 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 FREM1Q5H8C1 2179 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 MED13Q9UHV7 2174 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 PROP1O75360 226 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 NUDT3O95989 172 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 SP1P08047 785 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 IGFBP2P18065 325 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 MFAP2P55001 183 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 RPL8P62917 257 aaKnown RBP12.73□□□□□ -0.37
SSR4-206ENST00000460616 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 ATP1A1-AS1Q5TC04 95 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 Q6ZR03 302 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 SPATA12Q7Z6I5 190 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 KIR3DL3Q8N743 410 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 CSTL1Q9H114 145 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
SSR4-206ENST00000460616 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms