RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 NECAP1Q8NC96 275 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 SLC24A4Q8NFF2 622 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 OR5T1Q8NG75 326 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 RNASEH2CQ8TDP1 164 aaKnown RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 RBMXL1Q96E39 390 aaKnown RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 CXorf58Q96LI9 332 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 NOL4LQ96MY1 436 aaPredicted RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 SLC25A31Q9H0C2 315 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 LSM5Q9Y4Y9 91 aaKnown RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 F11RQ9Y624 299 aaKnown RBP9.7□□□□□ -0.86
HDAC4-206ENST00000460235 TNCP24821 2201 aa9.7□□□□□ -0.86
HDAC4-206ENST00000460235 LINC01548A6NM66 108 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 MPTX1A8MV57 137 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 G3V318 75 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 HAX1O00165 279 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 SSSCA1O60232 199 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 SIX6O95475 246 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 IFNA4P05014 189 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 OR8U8P0C7N1 319 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 NPY1RP25929 384 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 PPIFP30405 207 aaKnown RBP9.69□□□□□ -0.86
HDAC4-206ENST00000460235 BCAP31P51572 246 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 H2BFSP57053 126 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 POLR2GP62487 172 aaKnown RBP eCLIP9.69□□□□□ -0.86
HDAC4-206ENST00000460235 SSBP2P81877 361 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-206ENST00000460235 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 Q6ZS46 218 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 OR11H7Q8NGC8 314 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 PPP1R1CQ8WVI7 109 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 MAGT1Q9H0U3 335 aa9.69□□□□□ -0.86
HDAC4-206ENST00000460235 K7EPK0 472 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 DEDDO75618 318 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 NXPH3O95157 252 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 IGLV1-40P01703 118 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 TRGV3P03979 118 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 AREGP15514 252 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 MDKP21741 143 aaPredicted RBP9.68□□□□□ -0.86
HDAC4-206ENST00000460235 RAB9AP51151 201 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 PROK1P58294 105 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 TPPP2P59282 170 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 ATP5G2Q06055 141 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 WT1-ASQ06250 92 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 IL15RAQ13261 267 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 RAB32Q13637 225 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 C2orf68Q2NKX9 166 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 C19orf54Q5BKX5 351 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 C12orf54Q6X4T0 127 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 STX12Q86Y82 276 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 RNF152Q8N8N0 203 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 CHAC2Q8WUX2 184 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 DCUN1D4Q92564 292 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 ATP6V0BQ99437 205 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 LINC00527Q9UJ94 153 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
HDAC4-206ENST00000460235 FBXO7Q9Y3I1 522 aa9.68□□□□□ -0.86
HDAC4-206ENST00000460235 CGB1A6NKQ9 187 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 E7EUB6 86 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 CCNKO75909 580 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 MPC2O95563 127 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 APELAP0DMC3 54 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 IAPPP10997 89 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 SLC25A4P12235 298 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 MYOD1P15172 320 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 CXCL3P19876 107 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 PSMB8P28062 276 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 P2RY1P47900 373 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 CAV2P51636 162 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 HBG1P69891 147 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 HBG2P69892 147 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 CFHR3Q02985 330 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 KLK9Q2XQG4 91 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 TMEM95Q3KNT9 176 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 KRTAP24-1Q3LI83 254 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 AWAT1Q58HT5 328 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 SPINK9Q5DT21 86 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 SPANXN5Q5MJ07 72 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 PRSS54Q6PEW0 395 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 AKAP14Q86UN6 197 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 C3orf56Q8N813 242 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 OR2T35Q8NGX2 323 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 CACNG8Q8WXS5 425 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
HDAC4-206ENST00000460235 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 P2RX4Q99571 388 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 ZC4H2Q9NQZ6 224 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
HDAC4-206ENST00000460235 RCL1Q9Y2P8 373 aaKnown RBP9.67□□□□□ -0.86
HDAC4-206ENST00000460235 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 TCRBV4S1A1TA0A5B7 111 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 REG1AP05451 166 aa9.66□□□□□ -0.86
HDAC4-206ENST00000460235 RNASE2P10153 161 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms