RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CDKN1AP38936 164 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 EDDM3BP56851 147 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
HERC4-207ENST00000460168 C2orf68Q2NKX9 166 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 TEX36Q5VZQ5 186 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 C11orf87Q6NUJ2 197 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 Q6ZVH6 145 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 YPEL2Q96QA6 119 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 ASCL2Q99929 193 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 TMEM106BQ9NUM4 274 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 OR1A1Q9P1Q5 309 aa8.57□□□□□ -1.04
HERC4-207ENST00000460168 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 A0A0B4J2A0 478 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 C12orf77C9JDV5 145 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 K7EPK0 472 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 TMPRSS2O15393 492 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 RPL23AP62750 156 aaKnown RBP8.56□□□□□ -1.04
HERC4-207ENST00000460168 RUNX1Q01196 453 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 FAM71E2Q8N5Q1 922 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 RTN4IP1Q8WWV3 396 aaPredicted RBP8.56□□□□□ -1.04
HERC4-207ENST00000460168 CCL13Q99616 98 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 ZNF665Q9H7R5 613 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 SHPKQ9UHJ6 478 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 OR2W1Q9Y3N9 320 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
HERC4-207ENST00000460168 HRNRQ86YZ3 2850 aaPredicted RBP8.56□□□□□ -1.04
HERC4-207ENST00000460168 RAI1Q7Z5J4 1906 aaPredicted RBP8.56□□□□□ -1.04
HERC4-207ENST00000460168 ODAMA1E959 279 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 C19orf84I3L1E1 186 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 TUSC2O75896 110 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 GATA3P23771 443 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 OR13A1Q8NGR1 328 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 SDSLQ96GA7 329 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 GPR82Q96P67 336 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 VAMP8Q9BV40 100 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 PRR13Q9NZ81 148 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 FUT9Q9Y231 359 aa8.56□□□□□ -1.04
HERC4-207ENST00000460168 COL12A1Q99715 3063 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 IGKV1D-13A0A0B4J2D9 117 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 CRYM-AS1A6NIL9 109 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 NPIPB11E5RHQ5 1161 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 HBZP02008 142 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 IGKV1-13P0DP09 117 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 ZNF843Q8N446 348 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 FAM216BQ8N7L0 139 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 OR4B1Q8NGF8 309 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 OR1B1Q8NGR6 318 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 OR1L1Q8NH94 360 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 GAFA1Q96PS6 74 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 SCRT1Q9BWW7 348 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 MRPL16Q9NX20 251 aaKnown RBP8.55□□□□□ -1.04
HERC4-207ENST00000460168 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
HERC4-207ENST00000460168 SPINT2O43291 252 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 IGHG4P01861 327 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 HNRNPA3P51991 378 aaKnown RBP8.54□□□□□ -1.04
HERC4-207ENST00000460168 DUX4L9Q6RFH8 374 aaPredicted RBP8.54□□□□□ -1.04
HERC4-207ENST00000460168 TOMM20LQ6UXN7 152 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 ZNF788Q6ZQV5 615 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 ZNF818PQ6ZRF7 136 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 PNKDQ8N490 385 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 TMED6Q8WW62 240 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 OR5B12Q96R08 314 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 DCTN5Q9BTE1 182 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 NAA60Q9H7X0 242 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 FLNCQ14315 2725 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 ZNF462Q96JM2 2506 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 LY6G6FQ5SQ64 297 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 ZNF343Q6P1L6 599 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 TCTEX1D1Q8N7M0 179 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 OR10V1Q8NGI7 309 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 OR4X1Q8NH49 305 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 RFESDQ8TAC1 157 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 SPATA25Q9BR10 227 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 FAM234AQ9H0X4 552 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 SMDT1Q9H4I9 107 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 CCL28Q9NRJ3 127 aa8.54□□□□□ -1.04
HERC4-207ENST00000460168 TANC2Q9HCD6 1990 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 IGLC1P0CG04 106 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 IGFBP2P18065 325 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 LPAR6P43657 344 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 RND2P52198 227 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 HSD52Q0P140 79 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 SP6Q3SY56 376 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 FAM78BQ5VT40 261 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 NRGNQ92686 78 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 SEC22AQ96IW7 307 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 IMMP2LQ96T52 175 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 KCNS2Q9ULS6 477 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 LAMP3Q9UQV4 416 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 C13orf42A0A1B0GVH6 325 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 MPPED1O15442 326 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 PHF1O43189 567 aaPredicted RBP8.53□□□□□ -1.04
HERC4-207ENST00000460168 CD300EQ496F6 205 aaPredicted RBP8.53□□□□□ -1.04
HERC4-207ENST00000460168 P2RX4Q99571 388 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 SLC35B3Q9H1N7 401 aa8.53□□□□□ -1.04
HERC4-207ENST00000460168 SLC25A10Q9UBX3 287 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms