RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TNFSF15O95150 251 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 NDUFC2O95298 119 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 SRIP30626 198 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 EVX1P49640 407 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 POLR2HP52434 150 aaKnown RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 MAXP61244 160 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 DHRS2Q13268 280 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 MMDQ15546 238 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 RNASE10Q5GAN6 216 aaKnown RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 IBA57Q5T440 356 aaKnown RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 HAGHLQ6PII5 290 aaPredicted RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 SCIMPQ6UWF3 145 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 TMEM86AQ8N2M4 240 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 C12orf45Q8N5I9 185 aaPredicted RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 SLC30A7Q8NEW0 376 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 GPR146Q96CH1 333 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 CMBLQ96DG6 245 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 KLF6Q99612 283 aaPredicted RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 MND1Q9BWT6 205 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 SPANXCQ9NY87 97 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 ZNF230Q9UIE0 474 aaPredicted RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 ANAPC10Q9UM13 185 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 PCYT1BQ9Y5K3 369 aaPredicted RBP2.7□□□□□ -1.98
CCDC50-203ENST00000460064 U3KQK5 164 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 A2MP01023 1474 aa2.7□□□□□ -1.98
CCDC50-203ENST00000460064 DOCK3Q8IZD9 2030 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 DCCP43146 1447 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 SMG6Q86US8 1419 aaKnown RBP2.69□□□□□ -1.98
CCDC50-203ENST00000460064 hCG_1818297A0A087WSY0 165 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 A0A087WUU8 490 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 A8MT66 165 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 MRASO14807 208 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 GNG7O60262 68 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 CDS2O95674 445 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 IFNA4P05014 189 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 DBIP07108 87 aaKnown RBP2.69□□□□□ -1.98
CCDC50-203ENST00000460064 C8GP07360 202 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 METTL15P1P0C7V9 234 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 OR12D1P0DN82 309 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 CTSEP14091 401 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 HSPA9P38646 679 aaKnown RBP2.69□□□□□ -1.98
CCDC50-203ENST00000460064 ATP5G3P48201 142 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 PSMB3P49720 205 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 HIST1H1AQ02539 215 aaPredicted RBP2.69□□□□□ -1.98
CCDC50-203ENST00000460064 HTR4Q13639 388 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 RHEBQ15382 184 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 NEDD8Q15843 81 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 MORN2Q502X0 79 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 HES3Q5TGS1 186 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
CCDC50-203ENST00000460064 TCF23Q7RTU1 214 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 TSTD1Q8NFU3 115 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 OR11G2Q8NGC1 345 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 OR2T27Q8NH04 317 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 OR4C6Q8NH72 309 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 CARD19Q96LW7 228 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 CNBD2Q96M20 576 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 MED11Q9P086 117 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 GNG8Q9UK08 70 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 COQ4Q9Y3A0 265 aa2.69□□□□□ -1.98
CCDC50-203ENST00000460064 TRBV24-1A0A075B6N3 115 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 TRAV8-1A0A0A6YYK1 113 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 FAM92AA1XBS5 289 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 OR4C45A6NMZ5 311 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 PSCAO43653 123 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 BANF1O75531 89 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 S100A8P05109 93 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 RPL35P42766 123 aaKnown RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 INPP1P49441 399 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 ZNF140P52738 457 aaPredicted RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 LINC00313P59037 77 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 HERVK_113P63121 156 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 RELAQ04206 551 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 HRCT1Q6UXD1 115 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 KRTCAP2Q8N6L1 136 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 ZNF283Q8N7M2 679 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 OR5A1Q8NGJ0 315 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 OR13C8Q8NGS7 320 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 MUC7Q8TAX7 377 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 ADAT3Q96EY9 351 aaPredicted RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 ERMAPQ96PL5 475 aaPredicted RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 PKMYT1Q99640 499 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 B9D2Q9BPU9 175 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 TMEM70Q9BUB7 260 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 YIPF3Q9GZM5 350 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 EIF5A2Q9GZV4 153 aaKnown RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 PBOV1Q9GZY1 135 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 GPR84Q9NQS5 396 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 OR5V1Q9UGF6 321 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 ERG28Q9UKR5 140 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 CYSLTR1Q9Y271 337 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 LAMTOR2Q9Y2Q5 125 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 PHLDA3Q9Y5J5 127 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 IBTKQ9P2D0 1353 aaPredicted RBP2.68□□□□□ -1.98
CCDC50-203ENST00000460064 CECR2Q9BXF3 1484 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 CACNA1DQ01668 2161 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 LTBP4Q8N2S1 1624 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 PPIP5K1Q6PFW1 1433 aa2.68□□□□□ -1.98
CCDC50-203ENST00000460064 FGD6Q6ZV73 1430 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms