RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 USMG5Q96IX5 58 aa8.43□□□□□ -1.06
CCDC12-204ENST00000460035 ALX4Q9H161 411 aaPredicted RBP8.43□□□□□ -1.06
CCDC12-204ENST00000460035 PLEKHA3Q9HB20 300 aa8.43□□□□□ -1.06
CCDC12-204ENST00000460035 FBXL7Q9UJT9 491 aa8.43□□□□□ -1.06
CCDC12-204ENST00000460035 KLK9Q9UKQ9 250 aa8.43□□□□□ -1.06
CCDC12-204ENST00000460035 SORL1Q92673 2214 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 ANKRD34BA5PLL1 514 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 CEBPZOSA8MTT3 80 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 CYB5BO43169 146 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 NXPH3O95157 252 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 DUS4LO95620 317 aaKnown RBP8.42□□□□□ -1.06
CCDC12-204ENST00000460035 HIST1H1BP16401 226 aaKnown RBP8.42□□□□□ -1.06
CCDC12-204ENST00000460035 MYCNOSP40205 109 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 HOXA1P49639 335 aaPredicted RBP8.42□□□□□ -1.06
CCDC12-204ENST00000460035 SPCS3P61009 180 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 PRCDQ00LT1 54 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 RUNX1Q01196 453 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 SMCO1Q147U7 214 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 NMSQ5H8A3 153 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 NRARPQ7Z6K4 114 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 NECAP1Q8NC96 275 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 OR11H1Q8NG94 326 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 OR52B4Q8NGK2 314 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 OR1N2Q8NGR9 330 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 OR1S1Q8NH92 325 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 RAX2Q96IS3 184 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 TMED3Q9Y3Q3 217 aa8.42□□□□□ -1.06
CCDC12-204ENST00000460035 TRBV9A0A0B4J1U6 114 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 A0A1B0GU03 582 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 FAM223BA6NKX1 122 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 I3L521 148 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 NDUFB8O95169 186 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 IFNA21P01568 189 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 LGALS1P09382 135 aaKnown RBP8.41□□□□□ -1.06
CCDC12-204ENST00000460035 SNCAP37840 140 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 GGNBP1Q5YKI7 109 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 PLET1Q6UQ28 207 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 FAM223AQ8IWN6 122 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 OR2C3Q8N628 320 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 DUSP18Q8NEJ0 188 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 FANCD2OSQ96PS1 177 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 SEC22CQ9BRL7 303 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 THYN1Q9P016 225 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 CACFD1Q9UGQ2 172 aa8.41□□□□□ -1.06
CCDC12-204ENST00000460035 NOTCH1P46531 2555 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 INS-IGF2F8WCM5 200 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 LINC01619G3V211 115 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 ADAP1O75689 374 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 HSPB1P04792 205 aaKnown RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 CD33P20138 364 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 ZNF616Q08AN1 781 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 EXOSC2Q13868 293 aaKnown RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 C15orf32Q32M92 178 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 PDLIM3Q53GG5 364 aaPredicted RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 ETV3LQ6ZN32 361 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 OR1L6Q8NGR2 347 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 OR52E5Q8NH55 327 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 ZNF431Q8TF32 576 aaPredicted RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 MITD1Q8WV92 249 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 P2RX4Q99571 388 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 PALMDQ9NP74 551 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 HEYLQ9NQ87 328 aaPredicted RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 F11RQ9Y624 299 aaKnown RBP8.4□□□□□ -1.06
CCDC12-204ENST00000460035 S4R3C0 116 aa8.4□□□□□ -1.06
CCDC12-204ENST00000460035 NBEAL1Q6ZS30 2694 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 IGLV11-55A0A075B6I3 123 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 IGHV4OR15-8A0A075B7B6 117 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 A0A087WW49 117 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 IGHV3-21A0A0B4J1V1 117 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 INMT-MINDY4F8WBC2 141 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 SLC25A6P12236 298 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 SUB1P53999 127 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC12-204ENST00000460035 ZNF343Q6P1L6 599 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 C12orf45Q8N5I9 185 aaPredicted RBP8.39□□□□□ -1.07
CCDC12-204ENST00000460035 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 OR1P1Q8NH06 330 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 EEF1AKMT3Q96AZ1 226 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 MISP3Q96FF7 219 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 HIPK2Q9H2X6 1198 aa8.39□□□□□ -1.07
CCDC12-204ENST00000460035 GPN1Q9HCN4 374 aaPredicted RBP8.39□□□□□ -1.07
CCDC12-204ENST00000460035 RANGRFQ9HD47 186 aaPredicted RBP8.39□□□□□ -1.07
CCDC12-204ENST00000460035 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
CCDC12-204ENST00000460035 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 PITX3O75364 302 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 IL5P05113 134 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 SPNP16150 400 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 SLURP1P55000 103 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 MFAP2P55001 183 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 TNFRSF9Q07011 255 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 FHL3Q13643 280 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 PINX1Q96BK5 328 aaKnown RBP8.38□□□□□ -1.07
CCDC12-204ENST00000460035 CXorf58Q96LI9 332 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 RBKSQ9H477 322 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 GSKIPQ9P0R6 139 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 DMRT1Q9Y5R6 373 aa8.38□□□□□ -1.07
CCDC12-204ENST00000460035 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms