RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 DEFB108AA8MXU0 73 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 M0R143 59 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 UPK2O00526 184 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ISLRO14498 428 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 TNFSF13O75888 250 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 OR5G3P0C626 314 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 IGHV3-43DP0DP04 118 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 CRISP2P16562 243 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ADMP35318 185 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 FABP6P51161 128 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 UBE2G2P60604 165 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 RPL31P62899 125 aaKnown RBP5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF90Q03938 601 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 RBPJQ06330 500 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 C17orf58Q2M2W7 97 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ARSJQ5FYB0 599 aaPredicted RBP5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 OR10J3Q5JRS4 329 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ATP1A1-AS1Q5TC04 95 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 MIC13Q5XKP0 118 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 CYB5R2Q6BCY4 276 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 OR4A47Q6IF82 309 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM53AQ6NSI3 398 aaPredicted RBP5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 FAM71F2Q6NXP2 309 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 TEX43Q6ZNM6 134 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ABHD12Q8N2K0 398 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 STPG3Q8N7X2 389 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 C9orf106Q8NAJ2 232 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 ZNF439Q8NDP4 499 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 OR5B3Q8NH48 314 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 OR4A5Q8NH83 315 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 RFESDQ8TAC1 157 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 CMTM2Q8TAZ6 248 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 MISP3Q96FF7 219 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 MS4A10Q96PG2 267 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 NEU1Q99519 415 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 CHRDL1Q9BU40 450 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 PATZ1Q9HBE1 687 aaKnown RBP5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 IDI2-AS1Q9NZ38 188 aa5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 YTHDF2Q9Y5A9 579 aaKnown RBP5.03□□□□□ -1.6
UBQLN4-202ENST00000459954 HELTA6NFD8 242 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 AGFG2O95081 481 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 SCGB1D1O95968 90 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CA2P00918 260 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CRYAAP02489 173 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 EGR1P18146 543 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 RAB4AP20338 218 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF134P52741 427 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CASP6P55212 293 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 KLF3P57682 345 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 SELENOVP59797 346 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CX3CL1P78423 397 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 MRPS11P82912 194 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 MEF2CQ06413 473 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 RPL39P5Q59GN2 51 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CT45A1Q5HYN5 189 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 GCSAMLQ5JQS6 135 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 STUMQ69YW2 141 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 VWA1Q6PCB0 445 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 TOMM20LQ6UXN7 152 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 SLC25A48Q6ZT89 311 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 FAM231DQ6ZW35 169 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 SSX8Q7RTT4 187 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CXorf67Q86X51 503 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 TMEM256Q8N2U0 113 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF843Q8N446 348 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 RBMXL3Q8N7X1 1067 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CNEP1R1Q8N9A8 125 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 C8orf31Q8N9H6 132 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF114Q8NC26 417 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 OR2Z1Q8NG97 314 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CT45A3Q8NHU0 189 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 OSR1Q8TAX0 266 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 WIPF2Q8TF74 440 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 STARD4Q96DR4 205 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 SMIM12Q96EX1 92 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 ZNF714Q96N38 554 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 DERL1Q9BUN8 251 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 COMMD5Q9GZQ3 224 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 MRPL18Q9H0U6 180 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 MSL2Q9HCI7 577 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 RNF7Q9UBF6 113 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 DUSP13Q9UII6 198 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 RPUSD1Q9UJJ7 312 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 POLR3KQ9Y2Y1 108 aaPredicted RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 CHTOPQ9Y3Y2 248 aaKnown RBP5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 OR51B2Q9Y5P1 312 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 V9GYV3 84 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 ATRXP46100 2492 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 MYO18BQ8IUG5 2567 aa5.02□□□□□ -1.61
UBQLN4-202ENST00000459954 POLEQ07864 2286 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 TRAV3A0A0B4J244 114 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 A0A1W2PN81 502 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 SMIM27A0A1W2PRY6 76 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 J3KRW8 73 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 J3QR06 171 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 K7EN84 100 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 TCAPO15273 167 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 HLA-DQA1P01909 254 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 OR4A8P0C604 315 aa5.01□□□□□ -1.61
UBQLN4-202ENST00000459954 SAA2P0DJI9 122 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms