RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GALNT14Q96FL9 552 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
CD28-203ENST00000458610 F11RQ9Y624 299 aaKnown RBP12.41□□□□□ -0.42
CD28-203ENST00000458610 IFNA17P01571 189 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 IGKV1-5P01602 117 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 PRB2P02812 416 aaPredicted RBP12.4□□□□□ -0.42
CD28-203ENST00000458610 AKR1C4P17516 323 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 LINC00299Q6ZSB3 139 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 PLEKHA3Q9HB20 300 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 ENY2Q9NPA8 101 aa12.4□□□□□ -0.42
CD28-203ENST00000458610 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
CD28-203ENST00000458610 P0C879 139 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 SNCAP37840 140 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 SYNJ2BPP57105 145 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 TMEM268Q5VZI3 342 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 SELENOHQ8IZQ5 122 aaKnown RBP12.39□□□□□ -0.43
CD28-203ENST00000458610 OR2C3Q8N628 320 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 SLC35G3Q8N808 338 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 OR9G4Q8NGQ1 327 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 OR1P1Q8NH06 330 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 ATP6V0BQ99437 205 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 GAR1Q9NY12 217 aaKnown RBP12.39□□□□□ -0.43
CD28-203ENST00000458610 TMEM56-RWDD3S4R434 201 aa12.39□□□□□ -0.43
CD28-203ENST00000458610 A0A0B4J293 547 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 DBX1A6NMT0 343 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 TRBV12-3P01733 135 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 ARL3P36405 182 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 SUB1P53999 127 aaKnown RBP eCLIP12.38□□□□□ -0.43
CD28-203ENST00000458610 FAM106AQ4KMX7 169 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 TMEM128Q5BJH2 165 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 C19orf35Q6ZS72 473 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 LGI3Q8N145 548 aa12.38□□□□□ -0.43
CD28-203ENST00000458610 C7orf50Q9BRJ6 194 aaKnown RBP12.38□□□□□ -0.43
CD28-203ENST00000458610 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
CD28-203ENST00000458610 INS-IGF2F8WCM5 200 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 BMPR1BO00238 502 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 ST8SIA3O43173 380 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 CLEC3BP05452 202 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 TMEM187Q14656 261 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
CD28-203ENST00000458610 BAK1Q16611 211 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 CNPY1Q3B7I2 92 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 GPHB5Q86YW7 130 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 OR52E5Q8NH55 327 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 SIGLEC8Q9NYZ4 499 aa12.37□□□□□ -0.43
CD28-203ENST00000458610 A6NHS1 94 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 SPCS3P61009 180 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 IZUMO4Q1ZYL8 232 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 PLET1Q6UQ28 207 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 ZNF502Q8TBZ5 544 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 S100ZQ8WXG8 99 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 C21orf62Q9NYP8 219 aa12.36□□□□□ -0.43
CD28-203ENST00000458610 A0A0B4J2A0 478 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 MFSD2BA6NFX1 497 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 PPP5D1E7EU14 171 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 K7EIL1 84 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 LGALS9O00182 355 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 OR2C1O95371 312 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 LY86O95711 162 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 IGHV3-23P01764 117 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
CD28-203ENST00000458610 CENPSQ8N2Z9 138 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 LHFPL5Q8TAF8 219 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 GPR146Q96CH1 333 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 SHPKQ9UHJ6 478 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 S4R3C0 116 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 MEGF8Q7Z7M0 2845 aa12.35□□□□□ -0.43
CD28-203ENST00000458610 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 WI2-2373I1.2A0A1W2PRP0 233 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 CORTO00230 105 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 IL7P13232 177 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 VAMP1P23763 118 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 CCR6P51684 374 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 UBE2MP61081 183 aaKnown RBP12.34□□□□□ -0.43
CD28-203ENST00000458610 AARDQ4LEZ3 155 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 SPSB3Q6PJ21 355 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 SCARB1Q8WTV0 552 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
CD28-203ENST00000458610 TXN2Q99757 166 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 PALMDQ9NP74 551 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 DMRT1Q9Y5R6 373 aa12.34□□□□□ -0.43
CD28-203ENST00000458610 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 ZNF320A2RRD8 509 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 NDUFB6O95139 128 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 IGLV1-51P01701 117 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 GPR183P32249 361 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 MFAP2P55001 183 aa12.33□□□□□ -0.44
CD28-203ENST00000458610 MFAP4P55083 255 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms