RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
C9orf139-201ENST00000457302 IGKV1-39P01597 117 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 IGKV1D-39P04432 117 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 SNCAP37840 140 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
C9orf139-201ENST00000457302 SLURP1P55000 103 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 SRPXP78539 464 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 EXOSC2Q13868 293 aaKnown RBP9.5□□□□□ -0.89
C9orf139-201ENST00000457302 TMEM268Q5VZI3 342 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 TMED4Q7Z7H5 227 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 ZNF429Q86V71 674 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 OR10W1Q8NGF6 305 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 GLYATL2Q8WU03 294 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 DLX4Q92988 240 aaPredicted RBP9.5□□□□□ -0.89
C9orf139-201ENST00000457302 RBPMSQ93062 196 aaKnown RBP9.5□□□□□ -0.89
C9orf139-201ENST00000457302 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.5□□□□□ -0.89
C9orf139-201ENST00000457302 TMEM14BQ9NUH8 114 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 CACFD1Q9UGQ2 172 aa9.5□□□□□ -0.89
C9orf139-201ENST00000457302 TRBV7-1A0A0A6YYK4 115 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 LINC00854A0A1B0GVQ3 168 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 IGLC7A0M8Q6 106 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 SAP30O75446 220 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 NDUFB8O95169 186 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
C9orf139-201ENST00000457302 DEFA5Q01523 94 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 TMEM128Q5BJH2 165 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 KPRPQ5T749 579 aaPredicted RBP9.49□□□□□ -0.89
C9orf139-201ENST00000457302 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
C9orf139-201ENST00000457302 LGI3Q8N145 548 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 SLC35G3Q8N808 338 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 GALNT14Q96FL9 552 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 PLEKHA3Q9HB20 300 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 SORL1Q92673 2214 aa9.49□□□□□ -0.89
C9orf139-201ENST00000457302 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.48□□□□□ -0.89
C9orf139-201ENST00000457302 FAM240BA0A1B0GVZ2 78 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 A0A1B0GW64 132 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 CGB1A6NKQ9 187 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 IGKV1-5P01602 117 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 PRCDQ00LT1 54 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
C9orf139-201ENST00000457302 IL22RA2Q969J5 263 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 PEMTQ9UBM1 199 aa9.48□□□□□ -0.89
C9orf139-201ENST00000457302 IGLV11-55A0A075B6I3 123 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 GGCTO75223 188 aaKnown RBP9.47□□□□□ -0.89
C9orf139-201ENST00000457302 TCRBP04435 133 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 VAMP1P23763 118 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 ARL3P36405 182 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 BCAP31P51572 246 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 WT1-ASQ06250 92 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 TMEM187Q14656 261 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 FAM106AQ4KMX7 169 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 CLEC19AQ6UXS0 136 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 VN1R17PQ8TDU5 208 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 GAR1Q9NY12 217 aaKnown RBP9.47□□□□□ -0.89
C9orf139-201ENST00000457302 F11RQ9Y624 299 aaKnown RBP9.47□□□□□ -0.89
C9orf139-201ENST00000457302 TMEM56-RWDD3S4R434 201 aa9.47□□□□□ -0.89
C9orf139-201ENST00000457302 A0A0B4J293 547 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 DBX1A6NMT0 343 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 IGHV3-23P01764 117 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 CLEC3BP05452 202 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 HOXA1P49639 335 aaPredicted RBP9.46□□□□□ -0.9
C9orf139-201ENST00000457302 SYNJ2BPP57105 145 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 SPCS3P61009 180 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 KLF5Q13887 457 aaPredicted RBP9.46□□□□□ -0.9
C9orf139-201ENST00000457302 IZUMO4Q1ZYL8 232 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 KLK9Q2XQG4 91 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 PDLIM3Q53GG5 364 aaPredicted RBP9.46□□□□□ -0.9
C9orf139-201ENST00000457302 ACSM6Q6P461 480 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 PLET1Q6UQ28 207 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 C19orf35Q6ZS72 473 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 OR2C3Q8N628 320 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 OR1P1Q8NH06 330 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 ENKURQ8TC29 256 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 MRAPQ8TCY5 172 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 TMEM230Q96A57 120 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 KLK9Q9UKQ9 250 aa9.46□□□□□ -0.9
C9orf139-201ENST00000457302 A0A0B4J2A0 478 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 CEBPZOSA8MTT3 80 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 ST8SIA3O43173 380 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 NDUFB6O95139 128 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 LY86O95711 162 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 PRB2P02812 416 aaPredicted RBP9.45□□□□□ -0.9
C9orf139-201ENST00000457302 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 CCR6P51684 374 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 UBE2MP61081 183 aaKnown RBP9.45□□□□□ -0.9
C9orf139-201ENST00000457302 EGFEM1PQ0D2K5 195 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 OR9G4Q8NGQ1 327 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 OR52E5Q8NH55 327 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 PPP1R14BQ96C90 147 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 GPR146Q96CH1 333 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 MISP3Q96FF7 219 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 HIPK2Q9H2X6 1198 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 HEYLQ9NQ87 328 aaPredicted RBP9.45□□□□□ -0.9
C9orf139-201ENST00000457302 CACNG5Q9UF02 275 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 SHPKQ9UHJ6 478 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 S4R3C0 116 aa9.45□□□□□ -0.9
C9orf139-201ENST00000457302 DUXBA0A1W2PPF3 345 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms