RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 OR1L6Q8NGR2 347 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 RNASE11Q8TAA1 199 aaKnown RBP12.29□□□□□ -0.44
CPSF6-203ENST00000456847 CACNG8Q8WXS5 425 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 IGHV3-35A0A0C4DH35 117 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
CPSF6-203ENST00000456847 GUCA2BQ16661 112 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 SLIRPQ9GZT3 109 aaKnown RBP12.29□□□□□ -0.44
CPSF6-203ENST00000456847 PALMDQ9NP74 551 aa12.29□□□□□ -0.44
CPSF6-203ENST00000456847 RSL24D1Q9UHA3 163 aaKnown RBP12.29□□□□□ -0.44
CPSF6-203ENST00000456847 OR2T8A6NH00 312 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 TGOLN2O43493 480 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 MFAP2P55001 183 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 PRCDQ00LT1 54 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 IZUMO4Q1ZYL8 232 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 SP6Q3SY56 376 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 UBAC2Q8NBM4 344 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 OR4C16Q8NGL9 310 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 PLEKHA3Q9HB20 300 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 C21orf62Q9NYP8 219 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
CPSF6-203ENST00000456847 COL7A1Q02388 2944 aa12.28□□□□□ -0.44
CPSF6-203ENST00000456847 A8MWP6 167 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 CBLN1P23435 193 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 CD81P60033 236 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 Q56UQ5 140 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 MISP3Q96FF7 219 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 PDCD10Q9BUL8 212 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 TUBA4BQ9H853 241 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 SELENOKQ9Y6D0 94 aa12.27□□□□□ -0.44
CPSF6-203ENST00000456847 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-203ENST00000456847 TMEM213A2RRL7 107 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 IGKV1-5P01602 117 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.45
CPSF6-203ENST00000456847 SPINK9Q5DT21 86 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 OR2C3Q8N628 320 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 OR1P1Q8NH06 330 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 BSCL2Q96G97 398 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-203ENST00000456847 RCHY1Q96PM5 261 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 THAP7Q9BT49 309 aaPredicted RBP12.27□□□□□ -0.45
CPSF6-203ENST00000456847 SLC2A8Q9NY64 477 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 UFC1Q9Y3C8 167 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 CEPT1Q9Y6K0 416 aa12.27□□□□□ -0.45
CPSF6-203ENST00000456847 FABP12A6NFH5 140 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 GSTZ1O43708 216 aaPredicted RBP12.26□□□□□ -0.45
CPSF6-203ENST00000456847 TNFSF8P32971 234 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 ERHP84090 104 aaKnown RBP12.26□□□□□ -0.45
CPSF6-203ENST00000456847 UNQ9165/PRO28630Q6UXU0 137 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 SCARB1Q8WTV0 552 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
CPSF6-203ENST00000456847 PRRT1Q99946 306 aa12.26□□□□□ -0.45
CPSF6-203ENST00000456847 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 IFNA17P01571 189 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 UCP1P25874 307 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 SURF2Q15527 256 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 TM4SF20Q53R12 229 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 ZNF57Q68EA5 555 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 OR51S1Q8NGJ8 323 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 WDR89Q96FK6 387 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 NEURL2Q9BR09 285 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 C19orf73Q9NVV2 129 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 ANKRD20A5PA0PJZ0 165 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 A8MZ25 164 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 K7EIM0 57 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 OR5AC1P0C628 307 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 SPSB3Q6PJ21 355 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 BTNL8Q6UX41 500 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 MARC2Q969Z3 335 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 ZNF436Q9C0F3 470 aaPredicted RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 NXF2Q9GZY0 626 aaKnown RBP12.25□□□□□ -0.45
CPSF6-203ENST00000456847 NAA60Q9H7X0 242 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 MCUBQ9NWR8 336 aa12.25□□□□□ -0.45
CPSF6-203ENST00000456847 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-203ENST00000456847 ZNF114Q8NC26 417 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 TMEM190Q8WZ59 177 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
CPSF6-203ENST00000456847 ENY2Q9NPA8 101 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 GAR1Q9NY12 217 aaKnown RBP12.24□□□□□ -0.45
CPSF6-203ENST00000456847 MLXQ9UH92 298 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 SCP2D1Q9UJQ7 156 aa12.24□□□□□ -0.45
CPSF6-203ENST00000456847 ZNF785A8K8V0 405 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
CPSF6-203ENST00000456847 TMEM61Q8N0U2 210 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 ATP6V0BQ99437 205 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 C20orf24Q9BUV8 137 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 TMEM222Q9H0R3 208 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 C5orf66Q9H5L9 145 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 CD7P09564 240 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 P0C879 139 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 S100A5P33763 92 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 SNCAP37840 140 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 MFAP4P55083 255 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 DHODHQ02127 395 aa12.23□□□□□ -0.45
CPSF6-203ENST00000456847 CHRDL1Q9BU40 450 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms