RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 RAB3DO95716 219 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 TMBIM6P55061 237 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 PIGPP57054 158 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 MEF2DQ14814 521 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 HAGHQ16775 308 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 ANKRD55Q3KP44 614 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 STEAP1BQ6NZ63 245 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 CLVS1Q8IUQ0 354 aaPredicted RBP13.47□□□□□ -0.25
MSH6-207ENST00000456246 UXS1Q8NBZ7 420 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 TERB2Q8NHR7 220 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 TMEM190Q8WZ59 177 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 MIXL1Q9H2W2 232 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 COPZ2Q9P299 210 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
MSH6-207ENST00000456246 DBX1A6NMT0 343 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 NOL3O60936 208 aaKnown RBP13.46□□□□□ -0.25
MSH6-207ENST00000456246 IGKV1-39P01597 117 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 IGKV1D-39P04432 117 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 C8orf88P0DMB2 117 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 HSPE1P61604 102 aaKnown RBP13.46□□□□□ -0.25
MSH6-207ENST00000456246 SPCS2Q15005 226 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 UNQ9165/PRO28630Q6UXU0 137 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 TMEM61Q8N0U2 210 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 ZNF114Q8NC26 417 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 SCARB1Q8WTV0 552 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 CACNG8Q8WXS5 425 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 PLEKHA3Q9HB20 300 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 CEPT1Q9Y6K0 416 aa13.46□□□□□ -0.25
MSH6-207ENST00000456246 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.26
MSH6-207ENST00000456246 C3orf85A0A1B0GTC6 90 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 OR2T8A6NH00 312 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 K7EIM0 57 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 NDUFA4O00483 81 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 CTDSPLO15194 276 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 CD7P09564 240 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 EDN2P20800 178 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 AKR1C2P52895 323 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 PPP5CP53041 499 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 MFAP2P55001 183 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 ERHP84090 104 aaKnown RBP13.45□□□□□ -0.26
MSH6-207ENST00000456246 SCGB2B2Q4G0G5 96 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 TM4SF20Q53R12 229 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 SMIM4Q8WVI0 70 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 WDR89Q96FK6 387 aaPredicted RBP13.45□□□□□ -0.26
MSH6-207ENST00000456246 DAZ1Q9NQZ3 744 aaKnown RBP13.45□□□□□ -0.26
MSH6-207ENST00000456246 MLXQ9UH92 298 aa13.45□□□□□ -0.26
MSH6-207ENST00000456246 KMT2CQ8NEZ4 4911 aaKnown RBP13.44□□□□□ -0.26
MSH6-207ENST00000456246 OR11H12B2RN74 326 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 CTDSP2O14595 271 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 CTSDP07339 412 aaPredicted RBP13.44□□□□□ -0.26
MSH6-207ENST00000456246 PI3P19957 117 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 FCGR2BP31994 310 aaPredicted RBP13.44□□□□□ -0.26
MSH6-207ENST00000456246 Q56UQ5 140 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 LINC00322Q6ZN03 302 aaPredicted RBP13.44□□□□□ -0.26
MSH6-207ENST00000456246 OR4D10Q8NGI6 311 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 DYNC2LI1Q8TCX1 351 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 ISOC1Q96CN7 298 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 TP53RKQ96S44 253 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 TXN2Q99757 166 aa13.44□□□□□ -0.26
MSH6-207ENST00000456246 DISC1C4P0D8 188 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 RPL5P46777 297 aaKnown RBP13.43□□□□□ -0.26
MSH6-207ENST00000456246 RELQ04864 619 aaPredicted RBP13.43□□□□□ -0.26
MSH6-207ENST00000456246 IL18Q14116 193 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
MSH6-207ENST00000456246 TRIM16LQ309B1 348 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 RBPMS2Q6ZRY4 209 aaKnown RBP13.43□□□□□ -0.26
MSH6-207ENST00000456246 UBAC2Q8NBM4 344 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 OR52B4Q8NGK2 314 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 OR13C8Q8NGS7 320 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 PDCD10Q9BUL8 212 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 C5orf66Q9H5L9 145 aa13.43□□□□□ -0.26
MSH6-207ENST00000456246 C14orf166Q9Y224 244 aaKnown RBP13.43□□□□□ -0.26
MSH6-207ENST00000456246 IGHV3-35A0A0C4DH35 117 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 INS-IGF2F8WCM5 200 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 K7EMT4 169 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 NUPL2O15504 423 aaKnown RBP13.42□□□□□ -0.26
MSH6-207ENST00000456246 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 AKAIN1P0CW23 69 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 UCP1P25874 307 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 MFAP4P55083 255 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 DEFB125Q8N687 156 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 SLC35G3Q8N808 338 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 RRNAD1Q96FB5 475 aaKnown RBP13.42□□□□□ -0.26
MSH6-207ENST00000456246 MISP3Q96FF7 219 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 SPAG8Q99932 426 aaPredicted RBP13.42□□□□□ -0.26
MSH6-207ENST00000456246 SRD5A3Q9H8P0 318 aa13.42□□□□□ -0.26
MSH6-207ENST00000456246 C15orf62A8K5M9 175 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
MSH6-207ENST00000456246 I3L2K1 104 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 SCAF4O95104 1147 aaKnown RBP13.41□□□□□ -0.26
MSH6-207ENST00000456246 P0C879 139 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 LYL1P12980 280 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 LAMTOR1Q6IAA8 161 aa13.41□□□□□ -0.26
MSH6-207ENST00000456246 FAM219AQ8IW50 185 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms