RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 RHBDL2Q9NX52 303 aa5.93□□□□□ -1.46
NIF3L1-209ENST00000454952 FKBP11Q9NYL4 201 aa5.93□□□□□ -1.46
NIF3L1-209ENST00000454952 DAPK2Q9UIK4 370 aa5.93□□□□□ -1.46
NIF3L1-209ENST00000454952 F11RQ9Y624 299 aaKnown RBP5.93□□□□□ -1.46
NIF3L1-209ENST00000454952 HYDINQ4G0P3 5121 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 SSX5O60225 188 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM127O75204 238 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 CTSDP07339 412 aaPredicted RBP5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 HERV-K104P61576 105 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 EWSR1Q01844 656 aaKnown RBP eCLIP5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 Q56UQ5 140 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 SFXN4Q6P4A7 337 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 CENPSQ8N2Z9 138 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TSPAN14Q8NG11 270 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 OR5B3Q8NH48 314 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 OR51H1Q8NH63 302 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 C2CD4CQ8TF44 421 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 SCARB1Q8WTV0 552 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 GIMAP1Q8WWP7 306 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 FCGR1BQ92637 280 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM56Q96MV1 263 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TSC22D3Q99576 134 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TXN2Q99757 166 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 RARRES2Q99969 163 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 DIABLOQ9NR28 239 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 SMPXQ9UHP9 88 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 PRNDQ9UKY0 176 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 SSR3Q9UNL2 185 aa5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 RRP15Q9Y3B9 282 aaKnown RBP5.92□□□□□ -1.46
NIF3L1-209ENST00000454952 TRAV18A0A075B6X5 111 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 IGHV7-4-1A0A0J9YVY3 117 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 TEX50A0A1B0GTY4 177 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 MARCH11A6NNE9 402 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 C11orf94C9JXX5 98 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 DFFBO76075 338 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 S1PR2O95136 353 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 EIF4EP06730 217 aaKnown RBP5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 RPA2P15927 270 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 S100GP29377 79 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 FCGR2BP31994 310 aaPredicted RBP5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 FXYD4P59646 89 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 GABARAPL2P60520 117 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 WT1-ASQ06250 92 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM41BQ5BJD5 291 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 ZNF773Q6PK81 442 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 NR2C2APQ86WQ0 139 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 CMTM1Q8IZ96 169 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 UBAC2Q8NBM4 344 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM116Q8NCL8 245 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 OR5AP2Q8NGF4 316 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 OR10W1Q8NGF6 305 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 OR1P1Q8NH06 330 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 OR11H2Q8NH07 326 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 LGALS14Q8TCE9 139 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 GPHA2Q96T91 129 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 GINS3Q9BRX5 216 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 RHPN1-AS1Q9BWJ2 59 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 HINT2Q9BX68 163 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 NDUFA4L2Q9NRX3 87 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 TXNL4BQ9NX01 149 aaKnown RBP5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 FBXL17Q9UF56 701 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 OR51B2Q9Y5P1 312 aa5.91□□□□□ -1.46
NIF3L1-209ENST00000454952 TRAV14DV4A0A0A6YYC5 116 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TRAV2A0A0B4J234 112 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TRAV3A0A0B4J244 114 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 SMIM30A4D0T7 59 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 CHEK1O14757 476 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 DEDDO75618 318 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 YIF1AO95070 293 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 F2RP25116 425 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 MFAP4P55083 255 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TAS2R46P59540 309 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM187Q14656 261 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 UBE2UQ5VVX9 321 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 ZNF818PQ6ZRF7 136 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM17Q86X19 198 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 DGCR14Q96DF8 476 aaKnown RBP5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 OR10C1Q96KK4 312 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 CNBD2Q96M20 576 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 RNF2Q99496 336 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 CHRDL1Q9BU40 450 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 HRH4Q9H3N8 390 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 TMEM231Q9H6L2 316 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 IFT46Q9NQC8 304 aa5.9□□□□□ -1.46
NIF3L1-209ENST00000454952 K7EIM0 57 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 ZNF207O43670 478 aaKnown RBP5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 SCGB2A1O75556 95 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 CA1P00915 261 aaPredicted RBP5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 CTSGP08311 255 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 PSMB9P28065 219 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 GNRHRP30968 328 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 DHRS11Q6UWP2 260 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 CROCCP3Q8IVE0 287 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 APRG1Q8IVJ8 170 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 GVQW1Q8N7I0 195 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 NRG4Q8WWG1 115 aa5.89□□□□□ -1.47
NIF3L1-209ENST00000454952 MOB3AQ96BX8 217 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms