RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 USF1P22415 310 aaPredicted RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 GNLYP22749 145 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 RPL35P42766 123 aaKnown RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 RPS10P46783 165 aaKnown RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 PRRX1P54821 245 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 LINC00311Q8N616 119 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 OR2T6Q8NHC8 308 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 TIMD4Q96H15 378 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 PRORYQ9H606 182 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 LSM4Q9Y4Z0 139 aaKnown RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 C22orf46C9J442 243 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 RNASE2P10153 161 aaKnown RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 RAB5BP61020 215 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 HABP2Q14520 560 aaPredicted RBP9.52□□□□□ -0.89
VTA1-203ENST00000452973 RAB1CQ92928 201 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 CLEC7AQ9BXN2 247 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 PARLQ9H300 379 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 NDUFA4L2Q9NRX3 87 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
VTA1-203ENST00000452973 IGKV1OR2-108A0A075B7D4 117 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 FOXH1O75593 365 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 WT1-ASQ06250 92 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 GAMTQ14353 236 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 HLA-DRB5Q30154 266 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 VMA21Q3ZAQ7 101 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 FAM78BQ5VT40 261 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 HCP5Q6MZN7 132 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 C19orf35Q6ZS72 473 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 NEIL1Q96FI4 390 aaPredicted RBP9.51□□□□□ -0.89
VTA1-203ENST00000452973 TUBA4BQ9H853 241 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 UBTD1Q9HAC8 227 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 MANBALQ9NQG1 85 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CACNA1AO00555 2505 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 IGLV2-23P01705 113 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 FOSL1P15407 271 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 OR10J1P30954 320 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 TNXAQ16473 311 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 NECAP1Q8NC96 275 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 OR4P4Q8NGL7 312 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 VSTM2AQ8TAG5 236 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 Q8WTZ3 238 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 RPEQ96AT9 228 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 SSX3Q99909 188 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 HILPDAQ9Y5L2 63 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CFAP46Q8IYW2 2715 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 IGHV3-21A0A0B4J1V1 117 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 BUB1B-PAK6H3BSN5 160 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CTRB1P17538 263 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CD24P25063 80 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 MC5RP33032 325 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 TMEM241Q24JQ0 296 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CLEC12BQ2HXU8 276 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 RNF212Q495C1 297 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 CTRB2Q6GPI1 263 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 SPNS3Q6ZMD2 512 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 TMEM167AQ8TBQ9 72 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 MIOXQ9UGB7 285 aa9.51□□□□□ -0.89
VTA1-203ENST00000452973 SPG11Q96JI7 2443 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 A0A087X0M5 115 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 A0A1B0GX30 115 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 SEC14L6B5MCN3 397 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 S100A6P06703 90 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 CXCL1P09341 107 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
VTA1-203ENST00000452973 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 IGHV1-3A0A0C4DH29 117 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 CGB1A6NKQ9 187 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 IGLV1-47P01700 117 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 KLRD1Q13241 179 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 C2orf83Q53S99 150 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 ZNF596Q8TC21 504 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 DOK5Q9P104 306 aa9.5□□□□□ -0.89
VTA1-203ENST00000452973 LIPFP07098 398 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 LGALS4P56470 323 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 SSBP2P81877 361 aaPredicted RBP9.49□□□□□ -0.89
VTA1-203ENST00000452973 PLGLAQ15195 96 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 ELOBQ15370 118 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 ZFYVE26Q68DK2 2539 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 NDUFB4O95168 129 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 SFTPCP11686 197 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 HNF1AP20823 631 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 NPPCP23582 126 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 RHOBP62745 196 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 MIR17HGQ75NE6 70 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 BIN3Q9NQY0 253 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 PGPEP1LA6NFU8 196 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 CXorf1O96002 111 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 STAG3L2P0CL84 134 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 STAG3L3P0CL85 134 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 ZNF137PP52743 207 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 PNRC1Q12796 327 aaPredicted RBP9.49□□□□□ -0.89
VTA1-203ENST00000452973 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
VTA1-203ENST00000452973 FBXL15Q9H469 300 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms