RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 NKX2-8O15522 239 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 ZG16O60844 167 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
SMCO1-202ENST00000452776 FGF6P10767 208 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 SLC35B1P78383 322 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 FXYD3Q14802 87 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 CEACAM21Q3KPI0 293 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 KRTAP27-1Q3LI81 207 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 SSX8Q7RTT4 187 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 ZNF808Q8N4W9 903 aaPredicted RBP6.94□□□□□ -1.3
SMCO1-202ENST00000452776 NABP1Q96AH0 204 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 CHRNA10Q9GZZ6 450 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 GFRA4Q9GZZ7 299 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 ATG2BQ96BY7 2078 aa6.94□□□□□ -1.3
SMCO1-202ENST00000452776 ADAMTS9Q9P2N4 1935 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 C15orf62A8K5M9 175 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 A8MWL6 223 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 PRKNO60260 465 aaPredicted RBP6.93□□□□□ -1.3
SMCO1-202ENST00000452776 WISP1O95388 367 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 IGLV2-14P01704 120 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 YPEL5P62699 121 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 ODF1Q14990 250 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 TAL2Q16559 108 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 TMEM177Q53S58 311 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 PEAR1Q5VY43 1037 aaPredicted RBP6.93□□□□□ -1.3
SMCO1-202ENST00000452776 SLC23A3Q6PIS1 610 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 RAB37Q96AX2 223 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
SMCO1-202ENST00000452776 A0A1B0GW15 77 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 A0A1W2PP55 124 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ZNF716A6NP11 495 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 E9PLD3 99 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 H3BML4 177 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 RRHO14718 337 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 SYNGR3O43761 229 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 BCL3P20749 454 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 FBLP22087 321 aaKnown RBP6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ATP5IP56385 69 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-202ENST00000452776 PDCD1Q15116 288 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 GCSAMLQ5JQS6 135 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 DRAM1Q8N682 238 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 URB1-AS1Q96HZ7 61 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 MGST2Q99735 147 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 HEYLQ9NQ87 328 aaPredicted RBP6.92□□□□□ -1.3
SMCO1-202ENST00000452776 OR1A1Q9P1Q5 309 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 SHISA9B4DS77 424 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 IGHG4P01861 327 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 MYF5P13349 255 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 HERV-K104P63124 156 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 PSG5Q15238 335 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 LINC01559Q495D7 138 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 MIC13Q5XKP0 118 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ZFAND6Q6FIF0 208 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 SPEM1Q8N4L4 309 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 TMEM190Q8WZ59 177 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ABHD17AQ96GS6 310 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ZNF747Q9BV97 191 aa6.92□□□□□ -1.3
SMCO1-202ENST00000452776 LSM4Q9Y4Z0 139 aaKnown RBP6.92□□□□□ -1.3
SMCO1-202ENST00000452776 ALPK2Q86TB3 2170 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 SNRNP200O75643 2136 aaKnown RBP6.91□□□□□ -1.3
SMCO1-202ENST00000452776 TDRD6O60522 2096 aaKnown RBP6.91□□□□□ -1.3
SMCO1-202ENST00000452776 MYOFQ9NZM1 2061 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 GOLGA4Q13439 2230 aaKnown RBP6.91□□□□□ -1.3
SMCO1-202ENST00000452776 VWC2LB2RUY7 222 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 CXCL10P02778 98 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 G6PCP35575 357 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRR20EP86478 221 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRR20CP86479 221 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRR20DP86480 221 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRR20BP86481 221 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRR20AP86496 221 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 DAZAP2Q15038 168 aaPredicted RBP6.91□□□□□ -1.3
SMCO1-202ENST00000452776 GDF5OSQ5U4N7 250 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 ZNF562Q6V9R5 426 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 RPRMLQ8N4K4 120 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 TEX29Q8N6K0 151 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 SMRP1Q8NCR6 262 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 OR10X1Q8NGY0 326 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 OR1L3Q8NH93 324 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 RNF183Q96D59 192 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 MRPL32Q9BYC8 188 aaKnown RBP6.91□□□□□ -1.3
SMCO1-202ENST00000452776 PRDM6Q9NQX0 595 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 HCFC1R1Q9NWW0 138 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 SS18L2Q9UHA2 77 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 DOCK11Q5JSL3 2073 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 THADAQ6YHU6 1953 aa6.91□□□□□ -1.3
SMCO1-202ENST00000452776 SHANK1Q9Y566 2161 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 KMT2EQ8IZD2 1858 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 SPAARA0A1B0GVQ0 90 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 HIGD1CA8MV81 97 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 H3BMG7 143 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 CHEK1O14757 476 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 AGFG2O95081 481 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 CELA3AP09093 270 aa6.9□□□□□ -1.3
SMCO1-202ENST00000452776 HLA-DRB4P13762 266 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms