RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 IDNKQ5T6J7 187 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 SLC25A24Q6NUK1 477 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 OR5H6Q8NGV6 325 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 OR5B3Q8NH48 314 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 SCARB1Q8WTV0 552 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 C20orf24Q9BUV8 137 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 MAP6D1Q9H9H5 199 aa8.05□□□□□ -1.12
USP1-204ENST00000452143 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
USP1-204ENST00000452143 K7EIM0 57 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 RPA2P15927 270 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 ADMP35318 185 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 MFAP2P55001 183 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 CMC4P56277 68 aaPredicted RBP8.04□□□□□ -1.12
USP1-204ENST00000452143 RELQ04864 619 aaPredicted RBP8.04□□□□□ -1.12
USP1-204ENST00000452143 Q56UQ5 140 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 LGALS9CQ6DKI2 356 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 CMTM1Q8IZ96 169 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 GATAD1Q8WUU5 269 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 PHLDA1Q8WV24 401 aaPredicted RBP8.04□□□□□ -1.12
USP1-204ENST00000452143 MOB3AQ96BX8 217 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 TMEM56Q96MV1 263 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 TSC22D3Q99576 134 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 CHRDL1Q9BU40 450 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 IFT46Q9NQC8 304 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 FKBP11Q9NYL4 201 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 EHFQ9NZC4 300 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
USP1-204ENST00000452143 NUPL2O15504 423 aaKnown RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 SNAPC5O75971 98 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 CTSDP07339 412 aaPredicted RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 RPL35AP18077 110 aaKnown RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 FCGR2BP31994 310 aaPredicted RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 DHRS11Q6UWP2 260 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 UBAC2Q8NBM4 344 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 TSPAN14Q8NG11 270 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 OR1P1Q8NH06 330 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 FCAMRQ8WWV6 532 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 DGCR14Q96DF8 476 aaKnown RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 OR10C1Q96KK4 312 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 HINT2Q9BX68 163 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 YTHDF1Q9BYJ9 559 aaKnown RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 MFFQ9GZY8 342 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 C11orf68Q9H3H3 251 aaKnown RBP8.03□□□□□ -1.12
USP1-204ENST00000452143 TMEM14BQ9NUH8 114 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 SMPXQ9UHP9 88 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 ANAPC10Q9UM13 185 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 OR51B2Q9Y5P1 312 aa8.03□□□□□ -1.12
USP1-204ENST00000452143 HERC2O95714 4834 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 IGHV7-4-1A0A0J9YVY3 117 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 C15orf61A6NNL5 157 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 MPTX1A8MV57 137 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 XRCC3O43542 346 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 PGLYRP1O75594 196 aaPredicted RBP8.02□□□□□ -1.13
USP1-204ENST00000452143 KRASP01116 189 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CD5P06127 495 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 FCER2P06734 321 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CTSGP08311 255 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CLEC2LP0C7M8 214 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 TAS2R46P59540 309 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CROCCP3Q8IVE0 287 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 RPP25LQ8N5L8 163 aaKnown RBP8.02□□□□□ -1.13
USP1-204ENST00000452143 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CMTM3Q96MX0 182 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 RNF2Q99496 336 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 TXN2Q99757 166 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 ZNF2Q9BSG1 426 aaPredicted RBP8.02□□□□□ -1.13
USP1-204ENST00000452143 RHPN1-AS1Q9BWJ2 59 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 CSTL1Q9H114 145 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 Q9H521 79 aa8.02□□□□□ -1.13
USP1-204ENST00000452143 FAM212BQ9NTI7 297 aaPredicted RBP8.02□□□□□ -1.13
USP1-204ENST00000452143 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 IGHV3OR16-8A0A075B7F1 116 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 IGHV3-21A0A0B4J1V1 117 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 MEIS3P1A6NDR6 274 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 GPR31O00270 319 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 CHEK1O14757 476 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 ZNF207O43670 478 aaKnown RBP8.01□□□□□ -1.13
USP1-204ENST00000452143 S100GP29377 79 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 G6PCP35575 357 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 LPAR6P43657 344 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 RFX2P48378 723 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 TCTAP57738 103 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 UBE2NLQ5JXB2 153 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 APRG1Q8IVJ8 170 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 TMEM116Q8NCL8 245 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 OR5H2Q8NGV7 314 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 S100A16Q96FQ6 103 aaKnown RBP8.01□□□□□ -1.13
USP1-204ENST00000452143 RARRES2Q99969 163 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 NXF2Q9GZY0 626 aaKnown RBP8.01□□□□□ -1.13
USP1-204ENST00000452143 FXYD6Q9H0Q3 95 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 RNF167Q9H6Y7 350 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 NSG2Q9Y328 171 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 DNAH6Q9C0G6 4158 aa8.01□□□□□ -1.13
USP1-204ENST00000452143 TRAV14DV4A0A0A6YYC5 116 aa8□□□□□ -1.13
USP1-204ENST00000452143 NAT1P18440 290 aa8□□□□□ -1.13
USP1-204ENST00000452143 MFAP4P55083 255 aa8□□□□□ -1.13
USP1-204ENST00000452143 PAFAH1B2P68402 229 aa8□□□□□ -1.13
USP1-204ENST00000452143 RBMS2Q15434 407 aaKnown RBP8□□□□□ -1.13
USP1-204ENST00000452143 TMEM69Q5SWH9 247 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms