RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SLC25A17O43808 307 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 MPC2O95563 127 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 IGHV3-11P01762 117 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 RTL8BQ17RB0 113 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 ZNF562Q6V9R5 426 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 ZNF383Q8NA42 475 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 OR11H4Q8NGC9 324 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 DDB2Q92466 427 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 DCUN1D4Q92564 292 aa16.78■□□□□ 0.28
C9orf3-208ENST00000451893 MPTX1A8MV57 137 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 IGKV1-16P04430 117 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 LGALS1P09382 135 aaKnown RBP16.77■□□□□ 0.28
C9orf3-208ENST00000451893 SMCO1Q147U7 214 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 FXYD3Q14802 87 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 Q5BKY6 102 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 ZNF429Q86V71 674 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 OR4S2Q8NH73 311 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 WDR89Q96FK6 387 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-208ENST00000451893 HARBI1Q96MB7 349 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 SLA2Q9H6Q3 261 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 COA4Q9NYJ1 87 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 CACFD1Q9UGQ2 172 aa16.77■□□□□ 0.28
C9orf3-208ENST00000451893 TRAV14DV4A0A0A6YYC5 116 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 SHOXO15266 292 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 IGKV1-39P01597 117 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 TRGV3P03979 118 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 IGKV1D-39P04432 117 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 LYL1P12980 280 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 AKR1C2P52895 323 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 CRIP2P52943 208 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-208ENST00000451893 NKX2-5P52952 324 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-208ENST00000451893 SLURP1P55000 103 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 AKIRIN2Q53H80 203 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 PRSS54Q6PEW0 395 aa16.76■□□□□ 0.27
C9orf3-208ENST00000451893 RNASE11Q8TAA1 199 aaKnown RBP16.76■□□□□ 0.27
C9orf3-208ENST00000451893 FCGR3BO75015 233 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 LGALS7P47929 136 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 BRWD1-AS2P59051 145 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 LINC00205P59089 165 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 KIAA0141Q14154 515 aaPredicted RBP16.75■□□□□ 0.27
C9orf3-208ENST00000451893 ZNF546Q86UE3 836 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 OR4D5Q8NGN0 318 aa16.75■□□□□ 0.27
C9orf3-208ENST00000451893 ST8SIA3O43173 380 aa16.74■□□□□ 0.27
C9orf3-208ENST00000451893 SOX15O60248 233 aa16.74■□□□□ 0.27
C9orf3-208ENST00000451893 NHLRC4P0CG21 123 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-208ENST00000451893 C9orf62Q8N4C0 152 aa16.74■□□□□ 0.27
C9orf3-208ENST00000451893 GPR146Q96CH1 333 aa16.74■□□□□ 0.27
C9orf3-208ENST00000451893 IGHV4OR15-8A0A075B7B6 117 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 A0A087WW49 117 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 FXYD6-FXYD2A0A087WZ82 144 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 FAM90A26D6RGX4 464 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 PITX3O75364 302 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 HRASP01112 189 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 IGKV1-5P01602 117 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 HSPB1P04792 205 aaKnown RBP16.73■□□□□ 0.27
C9orf3-208ENST00000451893 P0C879 139 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 NQO2P16083 231 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 NUP62P37198 522 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-208ENST00000451893 NKX2-1P43699 371 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-208ENST00000451893 RAB32Q13637 225 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 ASPHD1Q5U4P2 390 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 INO80EQ8NBZ0 244 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-208ENST00000451893 DLX4Q92988 240 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-208ENST00000451893 WWC2-AS2Q96NR7 200 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 OR4C12Q96R67 309 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 RNF126Q9BV68 326 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 TPSG1Q9NRR2 321 aa16.73■□□□□ 0.27
C9orf3-208ENST00000451893 A0A0D9SG52 128 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 S1PR2O95136 353 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 EGR2P11161 476 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-208ENST00000451893 ERVK-16P61578 105 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 ID3Q02535 119 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 OR2F1Q13607 317 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 VMA21Q3ZAQ7 101 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 LRRC37A5PQ49AS3 106 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 C19orf54Q5BKX5 351 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 LAMTOR1Q6IAA8 161 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 H2BFWTQ7Z2G1 175 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 OR5T1Q8NG75 326 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 ELOVL1Q9BW60 279 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 TNFSF18Q9UNG2 199 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 HSPB11Q9Y547 144 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 SMAD5-AS1Q9Y6J3 95 aa16.72■□□□□ 0.27
C9orf3-208ENST00000451893 A0A0G2JLM5 398 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 E5RGE8 158 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 L7N2F9 121 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 DEDDO75618 318 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 KRASP01116 189 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 MBPP02686 304 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-208ENST00000451893 PVALBP20472 110 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-208ENST00000451893 ZNF345Q14585 488 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 POU2AF1Q16633 256 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 LGALSLQ3ZCW2 172 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-208ENST00000451893 ACOT7LQ6ZUV0 252 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 OR1S1Q8NH92 325 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 OSR1Q8TAX0 266 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-208ENST00000451893 ASCL2Q99929 193 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 MFFQ9GZY8 342 aa16.71■□□□□ 0.27
C9orf3-208ENST00000451893 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-208ENST00000451893 MBD2Q9UBB5 411 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms