RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 LYL1P12980 280 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 NUP62P37198 522 aaPredicted RBP10.22□□□□□ -0.77
VPS33A-202ENST00000451053 RPL27AP46776 148 aaKnown RBP10.22□□□□□ -0.77
VPS33A-202ENST00000451053 TAS2R30P59541 319 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 POLR2GP62487 172 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS33A-202ENST00000451053 RPL23AP62750 156 aaKnown RBP10.22□□□□□ -0.77
VPS33A-202ENST00000451053 PRCDQ00LT1 54 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 CD300CQ08708 224 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 ASPHD1Q5U4P2 390 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 NOXA1Q86UR1 476 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 LFNGQ8NES3 379 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 OR5AU1Q8NGC0 362 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 RBKSQ9H477 322 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 MBD2Q9UBB5 411 aa10.22□□□□□ -0.77
VPS33A-202ENST00000451053 RCL1Q9Y2P8 373 aaKnown RBP10.22□□□□□ -0.77
VPS33A-202ENST00000451053 FXYD6-FXYD2A0A087WZ82 144 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 TEX50A0A1B0GTY4 177 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 A0A1W2PN81 502 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 CGB1A6NKQ9 187 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 HMSDA8MTL9 139 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 TEX22C9J3V5 150 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 G3V3Q6 166 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 SMLR1H3BR10 107 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 CD28P10747 220 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 PPIFP30405 207 aaKnown RBP10.21□□□□□ -0.77
VPS33A-202ENST00000451053 CHRNA7P36544 502 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 HOXA1P49639 335 aaPredicted RBP10.21□□□□□ -0.77
VPS33A-202ENST00000451053 TMEM65Q6PI78 240 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 HSD17B13Q7Z5P4 300 aaPredicted RBP10.21□□□□□ -0.77
VPS33A-202ENST00000451053 C3orf56Q8N813 242 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 C11orf44Q8N8P7 122 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 DTD1Q8TEA8 209 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 DCUN1D4Q92564 292 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 SRSF8Q9BRL6 282 aaKnown RBP10.21□□□□□ -0.77
VPS33A-202ENST00000451053 ZNF747Q9BV97 191 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 HIPK2Q9H2X6 1198 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 PLEKHA3Q9HB20 300 aa10.21□□□□□ -0.77
VPS33A-202ENST00000451053 SOX15O60248 233 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 TSC22D2O75157 780 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 SCAF4O95104 1147 aaKnown RBP10.2□□□□□ -0.78
VPS33A-202ENST00000451053 P2RY1P47900 373 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 RPP30P78346 268 aaKnown RBP10.2□□□□□ -0.78
VPS33A-202ENST00000451053 SLC35B1P78383 322 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 AKIRIN2Q53H80 203 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 Q5BKY6 102 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 INO80EQ8NBZ0 244 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-202ENST00000451053 SMIM8Q96KF7 97 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 HINT2Q9BX68 163 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 HEYLQ9NQ87 328 aaPredicted RBP10.2□□□□□ -0.78
VPS33A-202ENST00000451053 NDUFA4L2Q9NRX3 87 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 OR5AC2Q9NZP5 309 aa10.2□□□□□ -0.78
VPS33A-202ENST00000451053 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 H0YIZ8 118 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 FBXO24O75426 580 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 IGHG4P01861 327 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 EIF2B2P49770 351 aaKnown RBP10.19□□□□□ -0.78
VPS33A-202ENST00000451053 ATP5IP56385 69 aaPredicted RBP10.19□□□□□ -0.78
VPS33A-202ENST00000451053 ERHP84090 104 aaKnown RBP10.19□□□□□ -0.78
VPS33A-202ENST00000451053 TMEM267Q0VDI3 215 aaPredicted RBP10.19□□□□□ -0.78
VPS33A-202ENST00000451053 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 OR5T1Q8NG75 326 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 CITED1Q99966 193 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 RNF126Q9BV68 326 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 PSENENQ9NZ42 101 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 TNFSF18Q9UNG2 199 aa10.19□□□□□ -0.78
VPS33A-202ENST00000451053 IGLC7A0M8Q6 106 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 ARPC5O15511 151 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 IGLV1-40P01703 118 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 IAPPP10997 89 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 AREGP15514 252 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 C4BPBP20851 252 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 CAV2P51636 162 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 TEX38Q6PEX7 206 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 C19orf35Q6ZS72 473 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 STX12Q86Y82 276 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 OR2C3Q8N628 320 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 OR10W1Q8NGF6 305 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 OR4X2Q8NGF9 303 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 FAM110DQ8TAY7 271 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-202ENST00000451053 CITED2Q99967 270 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-202ENST00000451053 C11orf1Q9H5F2 150 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 ZC4H2Q9NQZ6 224 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
VPS33A-202ENST00000451053 STRAPQ9Y3F4 350 aaKnown RBP10.18□□□□□ -0.78
VPS33A-202ENST00000451053 U3KQ87 197 aa10.18□□□□□ -0.78
VPS33A-202ENST00000451053 A0A0D9SG52 128 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 RPLP1P05386 114 aaKnown RBP10.17□□□□□ -0.78
VPS33A-202ENST00000451053 REG1AP05451 166 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 PSMB8P28062 276 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 RPL12P30050 165 aaKnown RBP10.17□□□□□ -0.78
VPS33A-202ENST00000451053 SNCAP37840 140 aa10.17□□□□□ -0.78
VPS33A-202ENST00000451053 HTR2BP41595 481 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms