RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 STPG3Q8N7X2 389 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CYB5D2Q8WUJ1 264 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 H1FXQ92522 213 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 C8orf44Q96CB5 159 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 EDA2RQ9HAV5 297 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ANK1P16157 1881 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 H0YJW9 148 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 H3BML4 177 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 UQCRQO14949 82 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 MRPL33O75394 65 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 HGFACQ04756 655 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FOXI1Q12951 378 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TMEM155Q4W5P6 130 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PRR30Q53SZ7 412 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 C2orf27AQ580R0 203 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CENPVQ7Z7K6 275 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 FAM19A2Q8N3H0 131 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 NUP37Q8NFH4 326 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 C11orf52Q96A22 123 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 IMUPQ9GZP8 106 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 OTORQ9NRC9 128 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FNDC1Q4ZHG4 1894 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 TRAV8-1A0A0A6YYK1 113 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 C9JQL5 133 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 J3QT63 122 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 J3QW42 95 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 GJB3O75712 270 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PVRP15151 417 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 IGLL1P15814 213 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PTGER1P34995 402 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 GNB1P62873 340 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 HOXA4Q00056 320 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 FXYD3Q14802 87 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ZNF77Q15935 545 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CLLU1OSQ5K130 101 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CDPF1Q6NVV7 123 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FOXI2Q6ZQN5 318 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 LINC00696Q6ZRV3 163 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TEN1Q86WV5 123 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PAQR4Q8N4S7 273 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 SMRP1Q8NCR6 262 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ZNF721Q8TF20 911 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CACNG8Q8WXS5 425 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PLEKHB2Q96CS7 222 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FOXC2Q99958 501 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PRADC1Q9BSG0 188 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ABHD14AQ9BUJ0 271 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CLEC7AQ9BXN2 247 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PNRC2Q9NPJ4 139 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 PLXNA3P51805 1871 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 SCN2AQ99250 2005 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TRGV8A0A0C4DH27 118 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 A0A1B0GX78 115 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FOXI3A8MTJ6 420 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 HIGD1CA8MV81 97 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ETV2O00321 342 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 NGFP01138 241 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 LINC00271P0C7V0 271 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CTLA4P16410 223 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ORM2P19652 201 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 HLA-DMBP28068 263 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 NPC2P61916 151 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TNXAQ16473 311 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 RRN3P1Q2M238 152 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 KIAA1644Q3SXP7 199 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 LINC00114Q6XXX2 140 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 MAFAQ8NHW3 353 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 DYNLRB2Q8TF09 96 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 WFDC6Q9BQY6 131 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 MBNL3Q9NUK0 354 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 INSIG2Q9Y5U4 225 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ZFHX2Q9C0A1 2572 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 CENPVL3A0A0U1RRI6 287 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TEX48A0A1B0GUV7 120 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 hDV102S1A0JD36 115 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 H7C1H1 209 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CCL16O15467 120 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ITGBL1O95965 494 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 WNT2P09544 360 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 SMIM10L1P0DMW3 83 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 TNFRSF1AP19438 455 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 PEBP1P30086 187 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 PTGDSP41222 190 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 LGALS7P47929 136 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 ZNF137PP52743 207 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CRYBA2P53672 197 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 NDUFV3P56181 108 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 C2orf82Q6UX34 121 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 C16orf52Q8NHV5 167 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 SMIM10Q96HG1 83 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 SPACA5Q96QH8 159 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 C1orf43Q9BWL3 253 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 GP6Q9HCN6 339 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FSCN3Q9NQT6 498 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 WDR83OSQ9Y284 106 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 KLF13Q9Y2Y9 288 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 MYO18AQ92614 2054 aaKnown RBP1.85□□□□□ -2.11
USP53-202ENST00000450251 DNAJC25-GNG10A0A024R161 153 aa1.85□□□□□ -2.11
USP53-202ENST00000450251 KNCNA6PVL3 124 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms