RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 CX3CL1P78423 397 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 C19orf54Q5BKX5 351 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 ABHD12Q8N2K0 398 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 GBF1Q92538 1859 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 A6NNC1 897 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 TGFBR3LH3BV60 316 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 RRHO14718 337 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 FAM106AQ4KMX7 169 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 MFAP4P55083 255 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 ACSF3Q4G176 576 aaPredicted RBP11.75□□□□□ -0.53
ITGB4-202ENST00000449880 TEX38Q6PEX7 206 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 UNQ5815/PRO19632Q6UWF5 114 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 OR4C13Q8NGP0 309 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 FNDC1Q4ZHG4 1894 aaPredicted RBP11.75□□□□□ -0.53
ITGB4-202ENST00000449880 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 IGHV2-70P01814 119 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 ORMDL3Q8N138 153 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 TPRX1Q8N7U7 411 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
ITGB4-202ENST00000449880 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 H7C2G1 150 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 ST6GALNAC6Q969X2 333 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 C9JCJ5 164 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 FOXA3P55318 350 aaPredicted RBP11.74□□□□□ -0.53
ITGB4-202ENST00000449880 LINC00305Q7Z4B0 112 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 ANAPC13Q9BS18 74 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 HS3ST3B1Q9Y662 390 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 IGHV1-69-2A0A0G2JMI3 117 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 A8MWP6 167 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 SYNGR3O43761 229 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 TIAF1O95411 115 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 TFPI2P48307 235 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 ATP5J2P56134 94 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 FADS6Q8N9I5 356 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 LDLRAD4O15165 306 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 COX6A1P12074 109 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 GFRA1P56159 465 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
ITGB4-202ENST00000449880 C1QTNF9P0C862 333 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 ADCYAP1P18509 176 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 DLX6P56179 175 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 RNFT1Q5M7Z0 435 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 OSR1Q8TAX0 266 aaPredicted RBP11.73□□□□□ -0.53
ITGB4-202ENST00000449880 PRDM6Q9NQX0 595 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 MTCL1Q9Y4B5 1905 aaKnown RBP11.73□□□□□ -0.53
ITGB4-202ENST00000449880 MST1P26927 711 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 GAGE1Q13065 139 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 AKIRIN1Q9H9L7 192 aaPredicted RBP11.73□□□□□ -0.53
ITGB4-202ENST00000449880 TMEM160Q9NX00 188 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 IGKV3D-11A0A0A0MRZ8 115 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 PDLIM4P50479 330 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 PCOLCEQ15113 449 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 GPR82Q96P67 336 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 C20orf144Q9BQM9 153 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 SPTA1P02549 2419 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 UBE2L6O14933 153 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 PLAUP00749 431 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 SLC25A53Q5H9E4 307 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 NUP37Q8NFH4 326 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 FNDC4Q9H6D8 234 aaPredicted RBP11.73□□□□□ -0.53
ITGB4-202ENST00000449880 MRPL27Q9P0M9 148 aaKnown RBP11.73□□□□□ -0.53
ITGB4-202ENST00000449880 CYSLTR1Q9Y271 337 aa11.73□□□□□ -0.53
ITGB4-202ENST00000449880 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 TYMSP04818 313 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 ARID1AO14497 2285 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 PPIAL4CA0A0B4J2A2 164 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 HIGD1CA8MV81 97 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 PPIAL4GP0DN37 164 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 CFPP27918 469 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 KLRB1Q12918 225 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 TMEM50AO95807 157 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 TIMP3P35625 211 aa11.72□□□□□ -0.53
ITGB4-202ENST00000449880 PAQR4Q8N4S7 273 aaPredicted RBP11.72□□□□□ -0.53
ITGB4-202ENST00000449880 HBDP02042 147 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 GZMBP10144 247 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 TMEM144Q7Z5S9 345 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 ZNF418Q8TF45 676 aaPredicted RBP11.71□□□□□ -0.53
ITGB4-202ENST00000449880 C1QTNF5Q9BXJ0 243 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 OTORQ9NRC9 128 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 PRR19A6NJB7 356 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 IGFBP2P18065 325 aa11.71□□□□□ -0.53
ITGB4-202ENST00000449880 CKAP5Q14008 2032 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms