RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SPSB3Q6PJ21 355 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 BTNL8Q6UX41 500 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 RBPMS2Q6ZRY4 209 aaKnown RBP11.5□□□□□ -0.57
CHD3-205ENST00000449744 UBAC2Q8NBM4 344 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 OR52B4Q8NGK2 314 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 SCARB1Q8WTV0 552 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 ISOC1Q96CN7 298 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 BSCL2Q96G97 398 aaPredicted RBP11.5□□□□□ -0.57
CHD3-205ENST00000449744 ABHD1Q96SE0 405 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 ZNF436Q9C0F3 470 aaPredicted RBP11.5□□□□□ -0.57
CHD3-205ENST00000449744 SRD5A3Q9H8P0 318 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 STAB2Q8WWQ8 2551 aa11.5□□□□□ -0.57
CHD3-205ENST00000449744 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 ATG12O94817 140 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 SCAF4O95104 1147 aaKnown RBP11.49□□□□□ -0.57
CHD3-205ENST00000449744 IGKV1-39P01597 117 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 IGKV1D-39P04432 117 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 PI3P19957 117 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 ALDH3B2P48448 385 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 MFAP2P55001 183 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 PIGPP57054 158 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 TAS2R19P59542 299 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 RND3P61587 244 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 CASC10Q5T4H9 136 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 TMEM229BQ8NBD8 167 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 OR1P1Q8NH06 330 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 ZFAND1Q8TCF1 268 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 ATP6V0BQ99437 205 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 WFDC10AQ9H1F0 79 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 GAR1Q9NY12 217 aaKnown RBP11.49□□□□□ -0.57
CHD3-205ENST00000449744 COPZ2Q9P299 210 aa11.49□□□□□ -0.57
CHD3-205ENST00000449744 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 K7EIM0 57 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 RAB3DO95716 219 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 AKR1C2P52895 323 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 PPP5CP53041 499 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 HSPE1P61604 102 aaKnown RBP11.48□□□□□ -0.57
CHD3-205ENST00000449744 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
CHD3-205ENST00000449744 PRCDQ00LT1 54 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 SCGB2B2Q4G0G5 96 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 LINC00322Q6ZN03 302 aaPredicted RBP11.48□□□□□ -0.57
CHD3-205ENST00000449744 CLVS1Q8IUQ0 354 aaPredicted RBP11.48□□□□□ -0.57
CHD3-205ENST00000449744 CCDC71LQ8N9Z2 235 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 TMEM190Q8WZ59 177 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 MISP3Q96FF7 219 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 MIXL1Q9H2W2 232 aa11.48□□□□□ -0.57
CHD3-205ENST00000449744 C3orf85A0A1B0GTC6 90 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 GABARAPH6UMI1 98 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 NDUFA4O00483 81 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 CTDSP2O14595 271 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 MRPS10P82664 201 aaKnown RBP11.47□□□□□ -0.57
CHD3-205ENST00000449744 SPCS2Q15005 226 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 TRIM16LQ309B1 348 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 STEAP1BQ6NZ63 245 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 OR2C3Q8N628 320 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 PDCD10Q9BUL8 212 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
CHD3-205ENST00000449744 DAZ1Q9NQZ3 744 aaKnown RBP11.47□□□□□ -0.57
CHD3-205ENST00000449744 RBMY1BA6NDE4 496 aaKnown RBP11.46□□□□□ -0.57
CHD3-205ENST00000449744 RBMY1EA6NEQ0 496 aaKnown RBP11.46□□□□□ -0.57
CHD3-205ENST00000449744 NUPL2O15504 423 aaKnown RBP11.46□□□□□ -0.57
CHD3-205ENST00000449744 CD74P04233 296 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 RBMY1DP0C7P1 496 aaKnown RBP11.46□□□□□ -0.57
CHD3-205ENST00000449744 MFAP4P55083 255 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 SSBP1Q04837 148 aaKnown RBP11.46□□□□□ -0.57
CHD3-205ENST00000449744 LAMTOR1Q6IAA8 161 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 OR4D10Q8NGI6 311 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 TP53RKQ96S44 253 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 CHRDL1Q9BU40 450 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 HIPK2Q9H2X6 1198 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 C5orf66Q9H5L9 145 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 RETNQ9HD89 108 aa11.46□□□□□ -0.57
CHD3-205ENST00000449744 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
CHD3-205ENST00000449744 IFNA17P01571 189 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 RELQ04864 619 aaPredicted RBP11.45□□□□□ -0.58
CHD3-205ENST00000449744 IL18Q14116 193 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 MEF2DQ14814 521 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 IZUMO4Q1ZYL8 232 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 ZFAND6Q6FIF0 208 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 ZNF114Q8NC26 417 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 OR13C8Q8NGS7 320 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 RNASE11Q8TAA1 199 aaKnown RBP11.45□□□□□ -0.58
CHD3-205ENST00000449744 MARCH1Q8TCQ1 289 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
CHD3-205ENST00000449744 DIRAS2Q96HU8 199 aa11.45□□□□□ -0.58
CHD3-205ENST00000449744 C14orf166Q9Y224 244 aaKnown RBP11.45□□□□□ -0.58
CHD3-205ENST00000449744 DISC1C4P0D8 188 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 F8W735 103 aaPredicted RBP11.44□□□□□ -0.58
CHD3-205ENST00000449744 K7EMT4 169 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 B3GALNT1O75752 331 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 MT-CO2P00403 227 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 IGKV1-5P01602 117 aa11.44□□□□□ -0.58
CHD3-205ENST00000449744 CTSDP07339 412 aaPredicted RBP11.44□□□□□ -0.58
CHD3-205ENST00000449744 ADMP35318 185 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms