RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 OR2T8A6NH00 312 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 A8MZ25 164 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 TGOLN2O43493 480 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 CD74P04233 296 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 ERHP84090 104 aaKnown RBP11.74□□□□□ -0.53
LIMS1-210ENST00000449684 Q56UQ5 140 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 ZNF57Q68EA5 555 aaPredicted RBP11.74□□□□□ -0.53
LIMS1-210ENST00000449684 ADAMTSL5Q6ZMM2 481 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 CACNG8Q8WXS5 425 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 BSCL2Q96G97 398 aaPredicted RBP11.74□□□□□ -0.53
LIMS1-210ENST00000449684 NEURL2Q9BR09 285 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 PDCD10Q9BUL8 212 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 UFC1Q9Y3C8 167 aa11.74□□□□□ -0.53
LIMS1-210ENST00000449684 DBX1A6NMT0 343 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 A8MWP6 167 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 AKAIN1P0CW23 69 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 EDN2P20800 178 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 HSPE1P61604 102 aaKnown RBP11.73□□□□□ -0.53
LIMS1-210ENST00000449684 TM4SF20Q53R12 229 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 SPSB3Q6PJ21 355 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 OR13C8Q8NGS7 320 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 MARCH1Q8TCQ1 289 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 DYNC2LI1Q8TCX1 351 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 SMIM4Q8WVI0 70 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 MARC2Q969Z3 335 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
LIMS1-210ENST00000449684 MISP3Q96FF7 219 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 TP53RKQ96S44 253 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 SELENOKQ9Y6D0 94 aa11.73□□□□□ -0.53
LIMS1-210ENST00000449684 TEX13DA0A0J9YY54 714 aaPredicted RBP11.72□□□□□ -0.53
LIMS1-210ENST00000449684 TMEM213A2RRL7 107 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 CCDC160A6NGH7 325 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 ZNF785A8K8V0 405 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 IFNA17P01571 189 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 PRCDQ00LT1 54 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 SP6Q3SY56 376 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 FAAP20Q6NZ36 180 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 RBPMS2Q6ZRY4 209 aaKnown RBP11.72□□□□□ -0.53
LIMS1-210ENST00000449684 SLC35G3Q8N808 338 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 SCARB1Q8WTV0 552 aa11.72□□□□□ -0.53
LIMS1-210ENST00000449684 WDR89Q96FK6 387 aaPredicted RBP11.72□□□□□ -0.53
LIMS1-210ENST00000449684 GAR1Q9NY12 217 aaKnown RBP11.72□□□□□ -0.53
LIMS1-210ENST00000449684 RSL24D1Q9UHA3 163 aaKnown RBP11.72□□□□□ -0.53
LIMS1-210ENST00000449684 B3GALNT1O75752 331 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 SCAF4O95104 1147 aaKnown RBP11.71□□□□□ -0.53
LIMS1-210ENST00000449684 CTSDP07339 412 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-210ENST00000449684 CD7P09564 240 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 SNCAP37840 140 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 MFAP2P55001 183 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 ELLP55199 621 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-210ENST00000449684 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 ANKRD55Q3KP44 614 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 BTNL8Q6UX41 500 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 MCFD2Q8NI22 146 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 ISOC1Q96CN7 298 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 ATP6V0BQ99437 205 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 THAP7Q9BT49 309 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-210ENST00000449684 C20orf24Q9BUV8 137 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 ENY2Q9NPA8 101 aa11.71□□□□□ -0.53
LIMS1-210ENST00000449684 MRPL27Q9P0M9 148 aaKnown RBP11.71□□□□□ -0.53
LIMS1-210ENST00000449684 FABP12A6NFH5 140 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 H3BMQ9 156 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 CTDSPLO15194 276 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
LIMS1-210ENST00000449684 MFAP4P55083 255 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 HAGHQ16775 308 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 SPINK9Q5DT21 86 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 OR52B4Q8NGK2 314 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 PINX1Q96BK5 328 aaKnown RBP11.7□□□□□ -0.54
LIMS1-210ENST00000449684 PRRT1Q99946 306 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 SPATA25Q9BR10 227 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 TM2D3Q9BRN9 247 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 ZNF436Q9C0F3 470 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-210ENST00000449684 MLXQ9UH92 298 aa11.7□□□□□ -0.54
LIMS1-210ENST00000449684 STAB2Q8WWQ8 2551 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 K7EIM0 57 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 NDUFA4O00483 81 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 IGKV1-5P01602 117 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 HOXA1P49639 335 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-210ENST00000449684 RELQ04864 619 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-210ENST00000449684 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
LIMS1-210ENST00000449684 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 DEFB125Q8N687 156 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 OR4C16Q8NGL9 310 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 TMEM190Q8WZ59 177 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 DAZ1Q9NQZ3 744 aaKnown RBP11.69□□□□□ -0.54
LIMS1-210ENST00000449684 MCUBQ9NWR8 336 aa11.69□□□□□ -0.54
LIMS1-210ENST00000449684 SCP2D1Q9UJQ7 156 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms