RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 GNG10P50151 68 aa8□□□□□ -1.13
CCDC171-203ENST00000449575 RPL23AP62750 156 aaKnown RBP8□□□□□ -1.13
CCDC171-203ENST00000449575 GNMTQ14749 295 aa8□□□□□ -1.13
CCDC171-203ENST00000449575 OR1L1Q8NH94 360 aa8□□□□□ -1.13
CCDC171-203ENST00000449575 GNPNAT1Q96EK6 184 aaPredicted RBP8□□□□□ -1.13
CCDC171-203ENST00000449575 OR6C3Q9NZP0 311 aa8□□□□□ -1.13
CCDC171-203ENST00000449575 IGKV1D-8A0A087WSZ0 117 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 KIR2DL5BA0A0G2JN68 375 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 KIR2DL5BA0A0G2JPC4 375 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 HSBP1L1C9JCN9 74 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 CRLF1O75462 422 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 KIR2DL5AQ8N109 375 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 MBNL3Q9NUK0 354 aaKnown RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 C2CD3Q4AC94 2353 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 NPIPB11E5RHQ5 1161 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 NPSP0C0P6 89 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 SRP14P37108 136 aaKnown RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 CCL20P78556 96 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 MRPL41Q8IXM3 137 aaKnown RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 CDC42EP3Q9UKI2 254 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 SOX15O60248 233 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 PITX3O75364 302 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 HBZP02008 142 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 OR10J1P30954 320 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 SRSF2Q01130 221 aaKnown RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 ACOT6Q3I5F7 207 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 SLC25A24Q6NUK1 477 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 ZNF880Q6PDB4 577 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 AJUBAQ96IF1 538 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 ZNF48Q96MX3 618 aaPredicted RBP7.99□□□□□ -1.13
CCDC171-203ENST00000449575 ST6GALNAC5Q9BVH7 336 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 GAL3ST2Q9H3Q3 398 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 ZNF286AQ9HBT8 521 aa7.99□□□□□ -1.13
CCDC171-203ENST00000449575 FBN1P35555 2871 aaKnown RBP7.98□□□□□ -1.13
CCDC171-203ENST00000449575 IGHV1-69DA0A0B4J2H0 117 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 SDCBPO00560 298 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-203ENST00000449575 CA11O75493 328 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 IGHV1-69P01742 117 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 SCTP09683 121 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 SRD5A1P18405 259 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 LOXL3P58215 753 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 RANP62826 216 aaKnown RBP7.98□□□□□ -1.13
CCDC171-203ENST00000449575 LHFPL4Q7Z7J7 247 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 LRTM2Q8N967 370 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 TXN2Q99757 166 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 LINC00574Q9H8X3 128 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 Q9N2K0 584 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 IGHV2-26A0A0B4J1V2 119 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 IGKV1-6A0A0C4DH72 117 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 ARSJQ5FYB0 599 aaPredicted RBP7.98□□□□□ -1.13
CCDC171-203ENST00000449575 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 OR10V1Q8NGI7 309 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 TMEM170AQ8WVE7 144 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 P2RX4Q99571 388 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 PYGO2Q9BRQ0 406 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 TMEM133Q9H2Q1 129 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 FKBP11Q9NYL4 201 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 IDI2-AS1Q9NZ38 188 aa7.98□□□□□ -1.13
CCDC171-203ENST00000449575 TRAV1-1A0A0B4J248 108 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 A0A0U1RQK1 487 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 SERPINE3A8MV23 424 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 SCGB1D1O95968 90 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 GZMHP20718 246 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 SAA4P35542 130 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 FAM3BP58499 235 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-203ENST00000449575 VAMP2P63027 116 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 EWSR1Q01844 656 aaKnown RBP eCLIP7.97□□□□□ -1.13
CCDC171-203ENST00000449575 PMS2P11Q13670 270 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 DYNAPQ8N1N2 210 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 IL1F10Q8WWZ1 152 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 PSG11Q9UQ72 335 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 ATRQ13535 2644 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 ITGB1BP1O14713 200 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 RBP4P02753 201 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 HNF1AP20823 631 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 ZNF134P52741 427 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 DMRTA1Q5VZB9 504 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 TEX38Q6PEX7 206 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 ZNF705AQ6ZN79 300 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-203ENST00000449575 LGI3Q8N145 548 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 ABHD12Q8N2K0 398 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 OR2C3Q8N628 320 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 RIMS4Q9H426 269 aaPredicted RBP7.97□□□□□ -1.13
CCDC171-203ENST00000449575 SDF2L1Q9HCN8 221 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 OR1A1Q9P1Q5 309 aa7.97□□□□□ -1.13
CCDC171-203ENST00000449575 RCL1Q9Y2P8 373 aaKnown RBP7.97□□□□□ -1.13
CCDC171-203ENST00000449575 TRBV6-6A0A0A6YYG2 114 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 A0A1W2PPQ1 181 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 F2RL2O00254 374 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 NPFFO15130 113 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 RPL29P47914 159 aaKnown RBP7.96□□□□□ -1.14
CCDC171-203ENST00000449575 UBE2E1P51965 193 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 TMEM241Q24JQ0 296 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 DEFB112Q30KQ8 113 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 ABCA11PQ4W5N1 156 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 ZNF66Q6ZN08 573 aa7.96□□□□□ -1.14
CCDC171-203ENST00000449575 ZNF2Q9BSG1 426 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms