RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 SNURFLB1AK76 121 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 RAMP3O60896 148 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 JUNBP17275 347 aaPredicted RBP6.8□□□□□ -1.32
HCG18-238ENST00000449544 SELENOTP62341 195 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 AANATQ16613 207 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 NHLRC3Q5JS37 347 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 LSM2Q9Y333 95 aaKnown RBP6.8□□□□□ -1.32
HCG18-238ENST00000449544 PCNX3Q9H6A9 2034 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 A0A0B4J2A0 478 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 FAM223BA6NKX1 122 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 ZNF429Q86V71 674 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 FAM223AQ8IWN6 122 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 LINC01587Q99440 93 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 PFDN5Q99471 154 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 SEC22CQ9BRL7 303 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 C1QTNF4Q9BXJ3 329 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 SHPKQ9UHJ6 478 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 VCANP13611 3396 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 BOLA2-SMG1P6H3BVE0 249 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 MFNGO00587 321 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 ARPC5O15511 151 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 MMP23AO75900 390 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 TSPAN15O95858 294 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 SNRPCP09234 159 aaKnown RBP6.8□□□□□ -1.32
HCG18-238ENST00000449544 OR4E1P0C645 316 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 TMEM78Q5T7P6 136 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 SPSB3Q6PJ21 355 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 RNF141Q8WVD5 230 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 TAF15Q92804 592 aaKnown RBP eCLIP6.8□□□□□ -1.32
HCG18-238ENST00000449544 MARC2Q969Z3 335 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 RCC1LQ96I51 464 aaKnown RBP6.8□□□□□ -1.32
HCG18-238ENST00000449544 NIPSNAP3BQ9BS92 247 aa6.8□□□□□ -1.32
HCG18-238ENST00000449544 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 IGLL1P15814 213 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 FOXE3Q13461 319 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 FHL1Q13642 323 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TCTEX1D4Q5JR98 221 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 H1FOOQ8IZA3 346 aaPredicted RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 CDH23Q9H251 3354 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 DYSFO75923 2080 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TRBV6-7A0A0A0MS04 114 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 MPTX1A8MV57 137 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 H0YJW9 148 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 RGS13O14921 159 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 POLR2GP62487 172 aaKnown RBP eCLIP6.79□□□□□ -1.32
HCG18-238ENST00000449544 C10orf113Q5VZT2 155 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 FAM122CQ6P4D5 195 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 CCBE1Q6UXH8 406 aaPredicted RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 BPIFA4PQ86YQ2 179 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 ZNF431Q8TF32 576 aaPredicted RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 IL22RA2Q969J5 263 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 RCL1Q9Y2P8 373 aaKnown RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 LHBP01229 141 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 DUTP33316 252 aaKnown RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 UBE2G2P60604 165 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 UBE2MP61081 183 aaKnown RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 TIGITQ495A1 244 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 ZNF343Q6P1L6 599 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 BTNL8Q6UX41 500 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 LYG2Q86SG7 212 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 AKAP14Q86UN6 197 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TMEM116Q8NCL8 245 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TNRC6BQ9UPQ9 1833 aaKnown RBP6.79□□□□□ -1.32
HCG18-238ENST00000449544 E5RGE8 158 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 UPK2O00526 184 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 LINC00869P0C866 280 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 HMGN3Q15651 99 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 SAMD13Q5VXD3 122 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TEPPQ6URK8 271 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 ZNF818PQ6ZRF7 136 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 C2orf50Q96LR7 162 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 MFFQ9GZY8 342 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 RPRMQ9NS64 109 aa6.79□□□□□ -1.32
HCG18-238ENST00000449544 TRBV7-1A0A0A6YYK4 115 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 JTBO76095 146 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 ZNF688P0C7X2 276 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 INSL3P51460 131 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 KRTAP24-1Q3LI83 254 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 ZNF546Q86UE3 836 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 PRR25Q96S07 402 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 ABHD1Q96SE0 405 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 RSG1Q9BU20 258 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 SLC25A5P05141 298 aaKnown RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 UBE2L3P68036 154 aaKnown RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 PSMG4Q5JS54 123 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 C11orf53Q8IXP5 236 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 EIF5A2Q9GZV4 153 aaKnown RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 ADAP1O75689 374 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 HBE1P02100 147 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 PSMB6P28072 239 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 FLI1Q01543 452 aaPredicted RBP6.78□□□□□ -1.32
HCG18-238ENST00000449544 IZUMO4Q1ZYL8 232 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 PLAC9Q5JTB6 97 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 Q8N7P7 452 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 SPATA3Q8NHX4 192 aa6.78□□□□□ -1.32
HCG18-238ENST00000449544 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms