RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 NOL4LQ96MY1 436 aaPredicted RBP11.53□□□□□ -0.56
TNF-208ENST00000449264 OR4C12Q96R67 309 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 ZNF702PQ9H963 129 aa11.53□□□□□ -0.56
TNF-208ENST00000449264 LYRM2Q9NU23 88 aaPredicted RBP11.53□□□□□ -0.56
TNF-208ENST00000449264 SETD2Q9BYW2 2564 aaPredicted RBP11.53□□□□□ -0.56
TNF-208ENST00000449264 G3V318 75 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 TSC22D2O75157 780 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.56
TNF-208ENST00000449264 LYL1P12980 280 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 NPY1RP25929 384 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 P2RY1P47900 373 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 NKX2-5P52952 324 aaPredicted RBP11.52□□□□□ -0.56
TNF-208ENST00000449264 SRSF2Q01130 221 aaKnown RBP11.52□□□□□ -0.56
TNF-208ENST00000449264 HSD17B13Q7Z5P4 300 aaPredicted RBP11.52□□□□□ -0.56
TNF-208ENST00000449264 NOXA1Q86UR1 476 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 ZC4H2Q9NQZ6 224 aa11.52□□□□□ -0.56
TNF-208ENST00000449264 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.56
TNF-208ENST00000449264 IGSF23A1L1A6 192 aa11.52□□□□□ -0.57
TNF-208ENST00000449264 CRYBA1P05813 215 aa11.52□□□□□ -0.57
TNF-208ENST00000449264 METTL15P1P0C7V9 234 aa11.52□□□□□ -0.57
TNF-208ENST00000449264 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.57
TNF-208ENST00000449264 HTR2BP41595 481 aa11.52□□□□□ -0.57
TNF-208ENST00000449264 AP2S1P53680 142 aaPredicted RBP11.52□□□□□ -0.57
TNF-208ENST00000449264 TAS2R30P59541 319 aa11.52□□□□□ -0.57
TNF-208ENST00000449264 INO80EQ8NBZ0 244 aaPredicted RBP11.52□□□□□ -0.57
TNF-208ENST00000449264 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
TNF-208ENST00000449264 C2CD3Q4AC94 2353 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 TRAV41A0A0B4J266 112 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 INS-IGF2F8WCM5 200 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 AP4M1O00189 453 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 CST7O76096 145 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 LY86O95711 162 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 OR8U8P0C7N1 319 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 RNASE2P10153 161 aaKnown RBP11.51□□□□□ -0.57
TNF-208ENST00000449264 DEFA4P12838 97 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 RPL12P30050 165 aaKnown RBP11.51□□□□□ -0.57
TNF-208ENST00000449264 RPP30P78346 268 aaKnown RBP11.51□□□□□ -0.57
TNF-208ENST00000449264 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 HYLS1Q96M11 299 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 P2RX4Q99571 388 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 TNFSF18Q9UNG2 199 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 U3KQ87 197 aa11.51□□□□□ -0.57
TNF-208ENST00000449264 PRH1P02810 166 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 IGF1P05019 195 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 HKR1P10072 659 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 CTRB1P17538 263 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
TNF-208ENST00000449264 CTRB2Q6GPI1 263 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 OR8G2PQ6IF36 304 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 STX12Q86Y82 276 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 TMEM252Q8N6L7 170 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 TMEM217Q8N7C4 229 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 TMEM170AQ8WVE7 144 aa11.5□□□□□ -0.57
TNF-208ENST00000449264 RNF222A6NCQ9 220 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 FBXO24O75426 580 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 IFNA4P05014 189 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.57
TNF-208ENST00000449264 RAB11AP62491 216 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
TNF-208ENST00000449264 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 AKIRIN2Q53H80 203 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 TMEM65Q6PI78 240 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 TMEM14EPQ6UXP3 125 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 Q6ZSV7 163 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 STPG2Q8N412 459 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 WNT10AQ9GZT5 417 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 MFFQ9GZY8 342 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 SLC25A31Q9H0C2 315 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
TNF-208ENST00000449264 HMSDA8MTL9 139 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 CRIP2P52943 208 aaPredicted RBP11.49□□□□□ -0.57
TNF-208ENST00000449264 NHLH2Q02577 135 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 TTC9CQ8N5M4 171 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 ZNF114Q8NC26 417 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 OR2T6Q8NHC8 308 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 FAM110DQ8TAY7 271 aaPredicted RBP11.49□□□□□ -0.57
TNF-208ENST00000449264 MISP3Q96FF7 219 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
TNF-208ENST00000449264 CXCL2P19875 107 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 SULT1A1P50225 295 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 MFAP2P55001 183 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
TNF-208ENST00000449264 DEFA5Q01523 94 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 SLC25A24Q6NUK1 477 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 ETV3LQ6ZN32 361 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 ACOT7LQ6ZUV0 252 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 Q8N2B8 174 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 OR1P1Q8NH06 330 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 PINX1Q96BK5 328 aaKnown RBP11.48□□□□□ -0.57
TNF-208ENST00000449264 BSCL2Q96G97 398 aaPredicted RBP11.48□□□□□ -0.57
TNF-208ENST00000449264 TMEM68Q96MH6 324 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 AQP10Q96PS8 301 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
TNF-208ENST00000449264 SOX15O60248 233 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 CRYGCP07315 174 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 C19orf54Q5BKX5 351 aa11.47□□□□□ -0.57
TNF-208ENST00000449264 ZNF329Q86UD4 541 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms