RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 SRP19P09132 144 aaKnown RBP14.21□□□□□ -0.13
LMNA-208ENST00000448611 CEACAM3P40198 252 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 KHDC3LQ587J8 217 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 TEPPQ6URK8 271 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 LHFPL4Q7Z7J7 247 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 MMD2Q8IY49 270 aa14.21□□□□□ -0.13
LMNA-208ENST00000448611 ACTR3CQ9C0K3 210 aaPredicted RBP14.21□□□□□ -0.13
LMNA-208ENST00000448611 IGHV2-70DA0A0C4DH43 119 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 YIF1AO95070 293 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 PDLIM4P50479 330 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 PMS2P11Q13670 270 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 HABP2Q14520 560 aaPredicted RBP14.21□□□□□ -0.14
LMNA-208ENST00000448611 FAM122CQ6P4D5 195 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 CLRN3Q8NCR9 226 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 RXFP4Q8TDU9 374 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 CFHR4Q92496 578 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 RAB24Q969Q5 203 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 CCL19Q99731 98 aa14.21□□□□□ -0.14
LMNA-208ENST00000448611 FAM74A7A6NL05 159 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 SEC14L6B5MCN3 397 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 VENTXO95231 258 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 OR13C7P0DN81 318 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 BCL2P10415 239 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 HOXB4P17483 251 aaPredicted RBP14.2□□□□□ -0.14
LMNA-208ENST00000448611 FAM74A3Q4VXF1 159 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 GCSAMLQ5JQS6 135 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 MIC13Q5XKP0 118 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 HILPDAQ9Y5L2 63 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 PXMP4Q9Y6I8 212 aa14.2□□□□□ -0.14
LMNA-208ENST00000448611 ZFP92A6NM28 416 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 CYB5BO43169 146 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 DEFA4P12838 97 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 MAS1LP35410 378 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 CD69Q07108 199 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 TMEM144Q7Z5S9 345 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 METTL1Q9UBP6 276 aaKnown RBP14.19□□□□□ -0.14
LMNA-208ENST00000448611 HMGB3O15347 200 aaKnown RBP14.19□□□□□ -0.14
LMNA-208ENST00000448611 NUPL2O15504 423 aaKnown RBP14.19□□□□□ -0.14
LMNA-208ENST00000448611 CDC34P49427 236 aaPredicted RBP14.19□□□□□ -0.14
LMNA-208ENST00000448611 PPP1R27Q86WC6 154 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 P2RX4Q99571 388 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 KCNIP2Q9NS61 270 aa14.19□□□□□ -0.14
LMNA-208ENST00000448611 A0A1W2PRD5 423 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 A0A1W2PRF3 423 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 A0A1W2PRM7 423 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 IGLC7A0M8Q6 106 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 FBP1P09467 338 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 COL8A1P27658 744 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 COMPP49747 757 aaPredicted RBP14.18□□□□□ -0.14
LMNA-208ENST00000448611 GAMTQ14353 236 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 TNXAQ16473 311 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 MLANAQ16655 118 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 SOHLH1Q5JUK2 328 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 SSMEM1Q8WWF3 244 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 PSMG3-AS1Q96PY0 264 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 FBXL15Q9H469 300 aa14.18□□□□□ -0.14
LMNA-208ENST00000448611 FASNP49327 2511 aaKnown RBP14.18□□□□□ -0.14
LMNA-208ENST00000448611 COX6B1P14854 86 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 RPL27AP46776 148 aaKnown RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 RPL29P47914 159 aaKnown RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 B2MP61769 119 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 RAB31Q13636 194 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 CACNG8Q8WXS5 425 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 DOPEY2Q9Y3R5 2298 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 USP9YO00507 2555 aaPredicted RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 IGKV1OR2-108A0A075B7D4 117 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 ACTL6BO94805 426 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 GPX4P36969 197 aaPredicted RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 SUB1P53999 127 aaKnown RBP eCLIP14.17□□□□□ -0.145e-11■■■■■ 47.2
LMNA-208ENST00000448611 SSBP2P81877 361 aaPredicted RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 PRR20EP86478 221 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 PRR20CP86479 221 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 PRR20DP86480 221 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 PRR20BP86481 221 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 PRR20AP86496 221 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 STPG3Q8N7X2 389 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 CYB561D1Q8N8Q1 229 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 RNASEH2CQ8TDP1 164 aaKnown RBP14.17□□□□□ -0.14
LMNA-208ENST00000448611 TMPRSS5Q9H3S3 457 aa14.17□□□□□ -0.14
LMNA-208ENST00000448611 TACC2O95359 2948 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 TOX4O94842 621 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 IFNA1P01562 189 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 PAX6P26367 422 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 MINOS1Q5TGZ0 78 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 SLC16A13Q7RTY0 426 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 DYNAPQ8N1N2 210 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 VAX2Q9UIW0 290 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 MINOS1-NBL1R4GNA1 71 aa14.16□□□□□ -0.14
LMNA-208ENST00000448611 OOSP1A8MZH6 123 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 FOXH1O75593 365 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 REG1AP05451 166 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 PVRIGQ6DKI7 326 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 TMEM88Q6PEY1 159 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 RBMS3Q6XE24 437 aaKnown RBP14.15□□□□□ -0.14
LMNA-208ENST00000448611 ZNF114Q8NC26 417 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 FAM168AQ92567 244 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 TBX15Q96SF7 602 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 SLC45A2Q9UMX9 530 aa14.15□□□□□ -0.14
LMNA-208ENST00000448611 POLR3KQ9Y2Y1 108 aaPredicted RBP14.15□□□□□ -0.14
LMNA-208ENST00000448611 CRYBG3Q68DQ2 2970 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms