RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 FCN2Q15485 313 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 MMD2Q8IY49 270 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 OR4A5Q8NH83 315 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 GRPEL2Q8TAA5 225 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 VSTM2AQ8TAG5 236 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 ASCL2Q99929 193 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 AIFM2Q9BRQ8 373 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 KLK15Q9H2R5 256 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 PARP11Q9NR21 331 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 MGAT4CQ9UBM8 478 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 WSB1Q9Y6I7 421 aa10.63□□□□□ -0.71
PDLIM2-213ENST00000448520 C5orf51A6NDU8 294 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 ATP6V0E1O15342 81 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 ST8SIA3O43173 380 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 RBMXL2O75526 392 aaKnown RBP10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 ATG12O94817 140 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 LY86O95711 162 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 SULT1A3P0DMM9 295 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 SULT1A4P0DMN0 295 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 EGR2P11161 476 aaPredicted RBP10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 CXCL3P19876 107 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 OR11H7Q8NGC8 314 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 OR4A16Q8NH70 328 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 ABHD5Q8WTS1 349 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 FYTTD1Q96QD9 318 aaKnown RBP10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 HINT2Q9BX68 163 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 TMED3Q9Y3Q3 217 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 OR51B2Q9Y5P1 312 aa10.62□□□□□ -0.71
PDLIM2-213ENST00000448520 TRAV41A0A0B4J266 112 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 G3V318 75 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 CNIH1O95406 144 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 IFNA21P01568 189 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 RPL27AP46776 148 aaKnown RBP10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 IAH1Q2TAA2 248 aaPredicted RBP10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 OR10W1Q8NGF6 305 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 OR1S1Q8NH92 325 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 SRSF12Q8WXF0 261 aaKnown RBP10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 MED28Q9H204 178 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 GNB4Q9HAV0 340 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 TMEM14BQ9NUH8 114 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 GSKIPQ9P0R6 139 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 STAB2Q8WWQ8 2551 aa10.61□□□□□ -0.71
PDLIM2-213ENST00000448520 MSGN1A6NI15 193 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 OVOL1O14753 267 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 PITX3O75364 302 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 ACTL6BO94805 426 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 H2BFSP57053 126 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 RRAS2P62070 204 aaPredicted RBP10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 TMEM267Q0VDI3 215 aaPredicted RBP10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 ASPHD1Q5U4P2 390 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 THOC7Q6I9Y2 204 aaKnown RBP10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 ZNF562Q6V9R5 426 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 C19orf35Q6ZS72 473 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 ZBTB8BQ8NAP8 495 aaPredicted RBP10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 DCUN1D4Q92564 292 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 COMMD5Q9GZQ3 224 aa10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.6□□□□□ -0.71
PDLIM2-213ENST00000448520 RYR3Q15413 4870 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 A0A1B0GU03 582 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 SCGB1D2O95969 90 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 REG1AP05451 166 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 AREGP15514 252 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 CRIP2P52943 208 aaPredicted RBP10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 ECSCRQ19T08 205 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 GSG1LQ6UXU4 331 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 CADM3Q8N126 398 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 OR4D5Q8NGN0 318 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 C2orf50Q96LR7 162 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 OR5B12Q96R08 314 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
PDLIM2-213ENST00000448520 LINC01619G3V211 115 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 IFNA17P01571 189 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 MAS1LP35410 378 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 HSPE1P61604 102 aaKnown RBP10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 LFNGQ8NES3 379 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 OR1L8Q8NGR8 309 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 MUC7Q8TAX7 377 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 CHAC2Q8WUX2 184 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 SPIN2AQ99865 258 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 SPIN2BQ9BPZ2 258 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 RBKSQ9H477 322 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 NDUFA4L2Q9NRX3 87 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
PDLIM2-213ENST00000448520 PIGBOS1A0A0B4J2F0 54 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 IGLC7A0M8Q6 106 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 SAP30O75446 220 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 TRAPPC2P0DI81 140 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 TRAPPC2BP0DI82 140 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 SLC25A6P12236 298 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 POLR2GP62487 172 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 PRCDQ00LT1 54 aa10.57□□□□□ -0.72
PDLIM2-213ENST00000448520 TNFRSF9Q07011 255 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms