RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 NPIPB4C9JG80 1138 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 PDCD6O75340 191 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 IGKV1-13P0DP09 117 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 DEFA4P12838 97 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 MALLQ13021 153 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 DIAPH2-AS1Q14236 149 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 PSG5Q15238 335 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 TMEM78Q5T7P6 136 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 TXNDC8Q6A555 127 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 Q6ZPA2 131 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 TMEM52Q8NDY8 209 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 C16orf52Q8NHV5 167 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 TM4SF19Q96DZ7 209 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 OXGR1Q96P68 337 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 GPHA2Q96T91 129 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 TMEM74BQ9NUR3 256 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 HIGD1BQ9P298 99 aa8.88□□□□□ -0.99
LINC00342-202ENST00000448494 SMIM9A6NGZ8 99 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 C2CD4DB7Z1M9 353 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 SCGB2A1O75556 95 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 MFAP2P55001 183 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 FHL3Q13643 280 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 IZUMO4Q1ZYL8 232 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 Q6ZSR3 168 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 IL1F10Q8WWZ1 152 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 DNAJC30Q96LL9 226 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 FGF22Q9HCT0 170 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 MRPS17Q9Y2R5 130 aaKnown RBP8.87□□□□□ -0.99
LINC00342-202ENST00000448494 ARHGAP21Q5T5U3 1957 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 IGKV1D-43A0A0B4J1Z2 117 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 IGLL5B9A064 214 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 CEACAM4O75871 244 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 DHRS3O75911 302 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 CLDN14O95500 239 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 P04436 131 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 PEAR1Q5VY43 1037 aaPredicted RBP8.87□□□□□ -0.99
LINC00342-202ENST00000448494 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 DGAT2L6Q6ZPD8 337 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 LINC00696Q6ZRV3 163 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 Q8N7P7 452 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 ZNF524Q96C55 264 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 SHANK1Q9Y566 2161 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 BRCA2P51587 3418 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 CEP290O15078 2479 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 CENPFP49454 3210 aa8.87□□□□□ -0.99
LINC00342-202ENST00000448494 TMEM262E9PQX1 116 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 GCHFRP30047 84 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC00342-202ENST00000448494 SRSF8Q9BRL6 282 aaKnown RBP8.86□□□□□ -0.99
LINC00342-202ENST00000448494 STARD5Q9NSY2 213 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 FAM90A18PA6NE21 464 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 FAM90A16PA6NEW6 464 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 FAM90A8PA6NJQ4 464 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 FAM90A9PA6NNJ1 464 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 MPDU1O75352 247 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 IGKV1-39P01597 117 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 IGKV1-5P01602 117 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 IGKV1D-39P04432 117 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 SLC25A5P05141 298 aaKnown RBP8.86□□□□□ -0.99
LINC00342-202ENST00000448494 IFITM1P13164 125 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 PRR30Q53SZ7 412 aaPredicted RBP8.86□□□□□ -0.99
LINC00342-202ENST00000448494 ZNF766Q5HY98 468 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 ADAMTSL4Q6UY14 1074 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 PPP1R32Q7Z5V6 425 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 TMEM178AQ8NBL3 297 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 COX14Q96I36 57 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 WDR83OSQ9Y284 106 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 ALPK2Q86TB3 2170 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 SZT2Q5T011 3432 aa8.86□□□□□ -0.99
LINC00342-202ENST00000448494 THADAQ6YHU6 1953 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 RRHO14718 337 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 Q6Q795 121 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 BCL6BQ8N143 479 aaPredicted RBP8.85□□□□□ -0.99
LINC00342-202ENST00000448494 LYZL4Q96KX0 146 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 MCRIP2Q9BUT9 160 aaKnown RBP8.85□□□□□ -0.99
LINC00342-202ENST00000448494 E9PLN8 166 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 CCL5P13501 91 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 EVI2AP22794 236 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 GCSHP23434 173 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 CTGFP29279 349 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 CD52P31358 61 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 FXYD2P54710 66 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 GAGE2BQ13066 116 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 GAGE2EQ4V326 116 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 OSR2Q8N2R0 312 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 PPDPFLQ8WWR9 84 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 RAB9BQ9NP90 201 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 IDI2-AS1Q9NZ38 188 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 GAGE2DQ9UEU5 116 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 DUSP13Q9UII6 198 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 PILRAQ9UKJ1 303 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 SOX21Q9Y651 276 aaPredicted RBP8.85□□□□□ -0.99
LINC00342-202ENST00000448494 WNT6Q9Y6F9 365 aa8.85□□□□□ -0.99
LINC00342-202ENST00000448494 NCOA6Q14686 2063 aaPredicted RBP8.84□□□□□ -0.99
LINC00342-202ENST00000448494 A0A0C4DFX4 3053 aa8.84□□□□□ -0.99
LINC00342-202ENST00000448494 TRAV5A0A0B4J249 113 aa8.84□□□□□ -0.99
LINC00342-202ENST00000448494 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
LINC00342-202ENST00000448494 TCTAP57738 103 aa8.84□□□□□ -0.99
LINC00342-202ENST00000448494 ERVK11-1P61568 191 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms