RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PPP1R14BQ96C90 147 aa15.41■□□□□ 0.06
SGCE-207ENST00000447873 PAIP2BQ9ULR5 123 aaKnown RBP15.41■□□□□ 0.06
SGCE-207ENST00000447873 STRAPQ9Y3F4 350 aaKnown RBP15.41■□□□□ 0.06
SGCE-207ENST00000447873 TEP1Q99973 2627 aaKnown RBP15.4■□□□□ 0.06
SGCE-207ENST00000447873 FAM24AA6NFZ4 105 aa15.4■□□□□ 0.06
SGCE-207ENST00000447873 TCF21O43680 179 aa15.4■□□□□ 0.06
SGCE-207ENST00000447873 EGR2P11161 476 aaPredicted RBP15.4■□□□□ 0.06
SGCE-207ENST00000447873 ECSCRQ19T08 205 aa15.4■□□□□ 0.06
SGCE-207ENST00000447873 ARSJQ5FYB0 599 aaPredicted RBP15.4■□□□□ 0.06
SGCE-207ENST00000447873 TNFSF18Q9UNG2 199 aa15.4■□□□□ 0.06
SGCE-207ENST00000447873 NF1P21359 2839 aa15.4■□□□□ 0.06
SGCE-207ENST00000447873 BOLA2-SMG1P6H3BVE0 249 aa15.39■□□□□ 0.05
SGCE-207ENST00000447873 SUB1P53999 127 aaKnown RBP eCLIP15.39■□□□□ 0.05
SGCE-207ENST00000447873 UBA52P62987 128 aaKnown RBP15.39■□□□□ 0.05
SGCE-207ENST00000447873 TMEM267Q0VDI3 215 aaPredicted RBP15.39■□□□□ 0.05
SGCE-207ENST00000447873 UNQ5815/PRO19632Q6UWF5 114 aa15.39■□□□□ 0.05
SGCE-207ENST00000447873 SLC25A31Q9H0C2 315 aa15.39■□□□□ 0.05
SGCE-207ENST00000447873 ZC4H2Q9NQZ6 224 aa15.39■□□□□ 0.05
SGCE-207ENST00000447873 NIPBLQ6KC79 2804 aaeCLIP15.39■□□□□ 0.05
SGCE-207ENST00000447873 AP4M1O00189 453 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 IGF1P05019 195 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 NPY1RP25929 384 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 RPL12P30050 165 aaKnown RBP15.38■□□□□ 0.05
SGCE-207ENST00000447873 ASPHD1Q5U4P2 390 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 TMEM252Q8N6L7 170 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 TMEM68Q96MH6 324 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 OR4C12Q96R67 309 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 MFFQ9GZY8 342 aa15.38■□□□□ 0.05
SGCE-207ENST00000447873 CRYBA1P05813 215 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 HKR1P10072 659 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 AP2S1P53680 142 aaPredicted RBP15.37■□□□□ 0.05
SGCE-207ENST00000447873 ATP5IP56385 69 aaPredicted RBP15.37■□□□□ 0.05
SGCE-207ENST00000447873 RPL15P61313 204 aaKnown RBP15.37■□□□□ 0.05
SGCE-207ENST00000447873 RAB11AP62491 216 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 BSXQ3C1V8 233 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 AKIRIN2Q53H80 203 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 TMEM14EPQ6UXP3 125 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 STX12Q86Y82 276 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 ZNF702PQ9H963 129 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 LINC00527Q9UJ94 153 aa15.37■□□□□ 0.05
SGCE-207ENST00000447873 TRAV41A0A0B4J266 112 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 IGSF23A1L1A6 192 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 C15orf62A8K5M9 175 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 NPIPB5A8MRT5 1133 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 G3V318 75 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 OR8U8P0C7N1 319 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 METTL15P1P0C7V9 234 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 RNASE2P10153 161 aaKnown RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 DEFA4P12838 97 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 CTRB1P17538 263 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 EIF2B2P49770 351 aaKnown RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 NKX2-5P52952 324 aaPredicted RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 C2orf83Q53S99 150 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 CTRB2Q6GPI1 263 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 ACOT7LQ6ZUV0 252 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 TTC9CQ8N5M4 171 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 ZNF114Q8NC26 417 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 AQP10Q96PS8 301 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 P2RX4Q99571 388 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 CST7O76096 145 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 IFNA4P05014 189 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 CRYGCP07315 174 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 SULT1A1P50225 295 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 CRIP2P52943 208 aaPredicted RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 EWSR1Q01844 656 aaKnown RBP eCLIP15.36■□□□□ 0.05
SGCE-207ENST00000447873 TMEM95Q3KNT9 176 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 OR5T1Q8NG75 326 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 TMEM170AQ8WVE7 144 aa15.36■□□□□ 0.05
SGCE-207ENST00000447873 NOL4LQ96MY1 436 aaPredicted RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 F11RQ9Y624 299 aaKnown RBP15.36■□□□□ 0.05
SGCE-207ENST00000447873 RNF222A6NCQ9 220 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 FBXO24O75426 580 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 NHLH2Q02577 135 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 ETV3LQ6ZN32 361 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 C19orf35Q6ZS72 473 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 OR1P1Q8NH06 330 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 WNT10AQ9GZT5 417 aa15.35■□□□□ 0.05
SGCE-207ENST00000447873 BAXQ07812 192 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 OR2F1Q13607 317 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 OR8G2PQ6IF36 304 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 Q8N2B8 174 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 STPG2Q8N412 459 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 TMEM217Q8N7C4 229 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 OR1L6Q8NGR2 347 aa15.34■□□□□ 0.05
SGCE-207ENST00000447873 FAM110DQ8TAY7 271 aaPredicted RBP15.34■□□□□ 0.05
SGCE-207ENST00000447873 CYB5BO43169 146 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 CXCL2P19875 107 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 ZNF345Q14585 488 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 LGALSLQ3ZCW2 172 aaPredicted RBP15.33■□□□□ 0.05
SGCE-207ENST00000447873 SLC25A24Q6NUK1 477 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 Q6ZSV7 163 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 OR10P1Q8NGE3 313 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 OR2T6Q8NHC8 308 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 GON7Q9BXV9 100 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 ZNF580Q9UK33 172 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 HSPB11Q9Y547 144 aa15.33■□□□□ 0.05
SGCE-207ENST00000447873 A0A0D9SG52 128 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 SCAF4O95104 1147 aaKnown RBP15.32■□□□□ 0.04
SGCE-207ENST00000447873 HBG1P69891 147 aa15.32■□□□□ 0.04
SGCE-207ENST00000447873 HBG2P69892 147 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms