RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 RPL18Q07020 188 aaKnown RBP2.34□□□□□ -2.03
PMS1-216ENST00000447734 BIKQ13323 160 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 LCA10Q71F78 164 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 ZNF767PQ75MW2 155 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 NUP35Q8NFH5 326 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 OR9Q1Q8NGQ5 310 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 OR5C1Q8NGR4 320 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 MUC7Q8TAX7 377 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 HSPB9Q9BQS6 159 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 TMEM138Q9NPI0 162 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 ASF1BQ9NVP2 202 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 LAMTOR3Q9UHA4 124 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 OR52A1Q9UKL2 312 aa2.34□□□□□ -2.03
PMS1-216ENST00000447734 YEATS2Q9ULM3 1422 aa2.34□□□□□ -2.04
PMS1-216ENST00000447734 ADAMTSL1Q8N6G6 1762 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 KIF13BQ9NQT8 1826 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 TRAV40A0A0B4J280 105 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 LOC102725191A0A1B0GVB3 256 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 FABP5P3A8MUU1 101 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 ZNF73O43830 326 aaPredicted RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 SOD1P00441 154 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 OGNP20774 298 aaKnown RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 S100A4P26447 101 aaKnown RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 HLA-DMBP28068 263 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 SRIP30626 198 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 CA5AP35218 305 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 ZNF80P51504 273 aaPredicted RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 RPS11P62280 158 aaKnown RBP eCLIP2.33□□□□□ -2.04
PMS1-216ENST00000447734 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 HTR4Q13639 388 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 CCDC153Q494R4 210 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 CCDC58Q4VC31 144 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 ZFAND6Q6FIF0 208 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 NOXRED1Q6NXP6 359 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 Q6P435 159 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 ZNF705AQ6ZN79 300 aaPredicted RBP2.33□□□□□ -2.04
PMS1-216ENST00000447734 CROCCP2Q86T23 111 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 OR10P1Q8NGE3 313 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 CCDC115Q96NT0 180 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 SCRT1Q9BWW7 348 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 SLC39A9Q9NUM3 307 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 PCTPQ9UKL6 214 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 NACAE9PAV3 2078 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 UHRF1BP1Q6BDS2 1440 aa2.33□□□□□ -2.04
PMS1-216ENST00000447734 C1orf196B1AJZ1 125 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 CYB5BO43169 146 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 CDS2O95674 445 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 NPYP01303 97 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 C1QAP02745 245 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 KRTAP1-4P0C5Y4 121 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 PSPHP78330 225 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 ZNF117Q03924 483 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 MIAQ16674 131 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 RRN3P1Q2M238 152 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 SPANXN3Q5MJ09 141 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 KTN1-AS1Q86SY8 53 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 TMEM86AQ8N2M4 240 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 CLDND2Q8NHS1 167 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 SMCR5Q8TEV8 140 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 THEM6Q8WUY1 208 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 DNAJC9Q8WXX5 260 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 CAPZA3Q96KX2 299 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 MIEN1Q9BRT3 115 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 OR2J1Q9GZK6 312 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 C16orf95Q9H693 158 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 TUBA4BQ9H853 241 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 RNF122Q9H9V4 155 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 SPANXCQ9NY87 97 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 CKLFQ9UBR5 152 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 JPT1Q9UK76 154 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 SMAD5-AS1Q9Y6J3 95 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 SCN4AP35499 1836 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 COL27A1Q8IZC6 1860 aaPredicted RBP2.32□□□□□ -2.04
PMS1-216ENST00000447734 MYO10Q9HD67 2058 aa2.32□□□□□ -2.04
PMS1-216ENST00000447734 IGLV4-60A0A075B6I1 120 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 IGKV2D-24A0A075B6R9 120 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 MDFIC2A0A1B0GVS7 189 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 IRGMA1A4Y4 181 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 C17orf98A8MV24 154 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 GGTLC3B5MD39 225 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 BUB1B-PAK6H3BSN5 160 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 K7EM74 188 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 DEGS1O15121 323 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 GADD45GO95257 159 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 FAM107AO95990 144 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 XCL1P47992 114 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 SRP9P49458 86 aaKnown RBP2.31□□□□□ -2.04
PMS1-216ENST00000447734 FOXA1P55317 472 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 CDC42P60953 191 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 C2orf91Q6ZV80 131 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 TRAPPC6BQ86SZ2 158 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 BPIFA4PQ86YQ2 179 aa2.31□□□□□ -2.04
PMS1-216ENST00000447734 ADAT3Q96EY9 351 aaPredicted RBP2.31□□□□□ -2.04
PMS1-216ENST00000447734 DOHHQ9BU89 302 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms