RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ZG16O60844 167 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 STAG3L3P0CL85 134 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 TM4SF4P48230 202 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 DEFB127Q9H1M4 99 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 MMP17Q9ULZ9 603 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 ANK1P16157 1881 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 RAB9AP51151 201 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 COL24A1Q17RW2 1714 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 OR2H2O95918 312 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 TWSG1Q9GZX9 223 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 TNFRSF19Q9NS68 423 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 PRDM14Q9GZV8 571 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 IGHV2OR16-5A0A0B4J2B6 119 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 SLC25A40Q8TBP6 338 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 SLC25A10Q9UBX3 287 aaPredicted RBP6.65□□□□□ -1.34
SMG1-202ENST00000446231 SOX21Q9Y651 276 aaPredicted RBP6.65□□□□□ -1.34
SMG1-202ENST00000446231 PRRC2AP48634 2157 aaKnown RBP6.65□□□□□ -1.34
SMG1-202ENST00000446231 PPIAL4EA0A075B759 164 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 PPIAL4FP0DN26 164 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 PRDX2P32119 198 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 CACNG8Q8WXS5 425 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 IGFBP2P18065 325 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 S100A4P26447 101 aaKnown RBP6.65□□□□□ -1.34
SMG1-202ENST00000446231 TNXAQ16473 311 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 MBNL2Q5VZF2 373 aaKnown RBP6.65□□□□□ -1.34
SMG1-202ENST00000446231 C10orf126Q8N4M7 172 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 ZNF502Q8TBZ5 544 aa6.65□□□□□ -1.34
SMG1-202ENST00000446231 C17orf98A8MV24 154 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 IL15RAQ13261 267 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 MAP1LC3AQ9H492 121 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 UBR3Q6ZT12 1888 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 PGPA6NDG6 321 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 DOT1LQ8TEK3 1739 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 LRRC10Q5BKY1 277 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 CLEC7AQ9BXN2 247 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 SEPSECSQ9HD40 501 aaKnown RBP6.65□□□□□ -1.35
SMG1-202ENST00000446231 FHL1Q13642 323 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.35
SMG1-202ENST00000446231 R4GN57 208 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 HES1Q14469 280 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 PRELID3AQ96N28 172 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 PKIBQ9C010 78 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 MRPS18CQ9Y3D5 142 aaKnown RBP6.65□□□□□ -1.35
SMG1-202ENST00000446231 A0A1W2PPC4 97 aa6.65□□□□□ -1.35
SMG1-202ENST00000446231 MRPL32Q9BYC8 188 aaKnown RBP6.65□□□□□ -1.35
SMG1-202ENST00000446231 PSMB11A5LHX3 300 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 RPL30P62888 115 aaKnown RBP6.64□□□□□ -1.35
SMG1-202ENST00000446231 SRSF7Q16629 238 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMG1-202ENST00000446231 SLC25A33Q9BSK2 321 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 GP6Q9HCN6 339 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 ERVK11-1P61568 191 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 H3BRM9 83 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 SPEM2Q0P670 501 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 ATP6V0BQ99437 205 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 GAB4Q2WGN9 574 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 RAMP3O60896 148 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 TMEM249Q2WGJ8 235 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 IGKV3-11P04433 115 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 RASL11AQ6T310 242 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 ZNF48Q96MX3 618 aaPredicted RBP6.64□□□□□ -1.35
SMG1-202ENST00000446231 RASL10BQ96S79 203 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 IGKV1D-43A0A0B4J1Z2 117 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 WDR31Q8NA23 367 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 DLL3Q9NYJ7 618 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 TRAV8-6A0A0B4J262 113 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 TMEM14EPQ6UXP3 125 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 FAM222BQ8WU58 562 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 NDUFA3O95167 84 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 Q6ZVH6 145 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 TUSC5Q8IXB3 177 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 RSPO4Q2I0M5 234 aaPredicted RBP6.64□□□□□ -1.35
SMG1-202ENST00000446231 BVES-AS1Q5T3Y7 98 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 WFDC3Q8IUB2 231 aa6.64□□□□□ -1.35
SMG1-202ENST00000446231 TDRG1Q3Y452 100 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 WIPI1Q5MNZ9 446 aaPredicted RBP6.63□□□□□ -1.35
SMG1-202ENST00000446231 FOXL2P58012 376 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 ZADH2Q8N4Q0 377 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 TMEM54Q969K7 222 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 PSG3Q16557 428 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 C10orf128Q5T292 105 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 RASL11BQ9BPW5 248 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 BEX4Q9NWD9 120 aaPredicted RBP6.63□□□□□ -1.35
SMG1-202ENST00000446231 IGHV1OR21-1A0A087WYE8 117 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 CXCL12P48061 93 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 ZDHHC16Q969W1 377 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 IFI27L2Q9H2X8 130 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 IGHV3OR15-7A0A075B7D8 119 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 WFDC8Q8IUA0 241 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 ZNF296Q8WUU4 475 aaPredicted RBP6.63□□□□□ -1.35
SMG1-202ENST00000446231 EAF1Q96JC9 268 aaPredicted RBP6.63□□□□□ -1.35
SMG1-202ENST00000446231 FOXC2Q99958 501 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 PLA2G2FQ9BZM2 168 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 A0A1W2PRE2 83 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 H3BTX0 84 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 M0R1B8 84 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 ATP5LO75964 103 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 GPR82Q96P67 336 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 ZNF236Q9UL36 1845 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 KIAA1549Q9HCM3 1950 aa6.63□□□□□ -1.35
SMG1-202ENST00000446231 REG1AP05451 166 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms