RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 SPIN2BQ9BPZ2 258 aa2.98□□□□□ -1.93
UBR3-206ENST00000444475 IL25Q9H293 177 aa2.98□□□□□ -1.93
UBR3-206ENST00000444475 TAS2R8Q9NYW2 309 aa2.98□□□□□ -1.93
UBR3-206ENST00000444475 SCN11AQ9UI33 1791 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 ARAP2Q8WZ64 1704 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 TMEM272A0A1B0GTI8 110 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SMIM35A0A1B0GVV1 85 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 COLCA2A8K830 154 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 INAFM1C9JVW0 142 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 LGALS9O00182 355 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 AGPAT2O15120 278 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 IGHV3-43DP0DP04 118 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 GNB2P62879 340 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 HERVK_113P63121 156 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 FOXI1Q12951 378 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 C10orf91Q5T1B1 145 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 ATP5L2Q7Z4Y8 100 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 ZNF575Q86XF7 245 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 OR9G1Q8NH87 305 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 GNPNAT1Q96EK6 184 aaPredicted RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 NMNAT3Q96T66 252 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 PAXXQ9BUH6 204 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 DERL1Q9BUN8 251 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 TMEM191AQ9H0A3 160 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 PLEKHF2Q9H8W4 249 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SOX21Q9Y651 276 aaPredicted RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 ZNF638Q14966 1978 aaKnown RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 FAM236AA0A1B0GUQ0 79 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 FAM236BA0A1B0GV22 79 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 H2AFZP0C0S5 128 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 IL2RGP31785 369 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 OPRK1P41145 380 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 NMUP48645 174 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 CATR1Q13166 79 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 LCE2CQ5TA81 110 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 MSRB3Q8IXL7 192 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SLC22A24Q8N4F4 322 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 RPP25LQ8N5L8 163 aaKnown RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 SGMS2Q8NHU3 365 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 TSSK6Q9BXA6 273 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SCN5AQ14524 2016 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 ADGRB1O14514 1584 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 MYH6P13533 1939 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 TRAV8-1A0A0A6YYK1 113 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 GABARAPH6UMI1 98 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 M0R381 172 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 PIRO00625 290 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 GFRA3O60609 400 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 ZNF432O94892 652 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 IGLC1P0CG04 106 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 IL7P13232 177 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 NDUFV3P56181 108 aaKnown RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 MP68P56378 58 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 MUC21Q5SSG8 566 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 AMTNQ6UX39 209 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 LINC00173Q6ZV60 143 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 DCANP1Q8TF63 244 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 WWC2-AS2Q96NR7 200 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SNRNP25Q9BV90 132 aaKnown RBP2.97□□□□□ -1.93
UBR3-206ENST00000444475 CA10Q9NS85 328 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 CBLN4Q9NTU7 201 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 TP73-AS1Q9UF72 201 aa2.97□□□□□ -1.93
UBR3-206ENST00000444475 SMIM26A0A096LP01 95 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 K7EPK0 472 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 ANGPTL7O43827 346 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 SPINK2P20155 84 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 OR10J1P30954 320 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 PSMB3P49720 205 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 RTL8BQ17RB0 113 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 ZNF773Q6PK81 442 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 IMUPQ9GZP8 106 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 WDR61Q9GZS3 305 aaKnown RBP2.96□□□□□ -1.94
UBR3-206ENST00000444475 SIX2Q9NPC8 291 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 FBXL12Q9NXK8 326 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 KIAA1671Q9BY89 1806 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 DOT1LQ8TEK3 1739 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 CACNA1AO00555 2505 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 MIA3Q5JRA6 1907 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
UBR3-206ENST00000444475 IGLV3-27P01718 113 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 CD48P09326 243 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 OR12D1P0DN82 309 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 VDAC2P45880 294 aaPredicted RBP2.96□□□□□ -1.94
UBR3-206ENST00000444475 NCBP2P52298 156 aaKnown RBP eCLIP2.96□□□□□ -1.94
UBR3-206ENST00000444475 TAS2R46P59540 309 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 LRP11Q86VZ4 500 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 LINC01555Q8NAE3 123 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 LRRC29Q8WV35 223 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 TAF15Q92804 592 aaKnown RBP eCLIP2.96□□□□□ -1.94
UBR3-206ENST00000444475 BORCS8Q96FH0 119 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 MIEN1Q9BRT3 115 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 PCTPQ9UKL6 214 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 POMPQ9Y244 141 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 RNF11Q9Y3C5 154 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 COL4A3Q01955 1670 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 A0A1B0GVT2 93 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 ZNF503-AS2A6NEH8 195 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 MYL12BO14950 172 aa2.96□□□□□ -1.94
UBR3-206ENST00000444475 IGLV2-8P01709 118 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms