RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 ANAPC16Q96DE5 110 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 OR10C1Q96KK4 312 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 DUX5Q96PT3 197 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 REG4Q9BYZ8 158 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 NAT8Q9UHE5 227 aa11.65□□□□□ -0.54
SMARCA4-204ENST00000444061 KRTDAPP60985 99 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 YTHDF2Q9Y5A9 579 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 LDLRAD4O15165 306 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 NAPSAO96009 420 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 EAF1Q96JC9 268 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 MYO18BQ8IUG5 2567 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV3-35A0A0C4DH35 117 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 PMS2P11Q13670 270 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 IGKV1D-8A0A087WSZ0 117 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 DEDDO75618 318 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 SRSF7Q16629 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 DEFB113Q30KQ7 82 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 FAM74A3Q4VXF1 159 aa11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-204ENST00000444061 RBFOX2O43251 390 aaKnown RBP eCLIP11.63□□□□□ -0.553e-7■■□□□ 14.3
SMARCA4-204ENST00000444061 CFDP00746 253 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 ASCL4Q6XD76 172 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 GTF2H5Q6ZYL4 71 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 STPG3Q8N7X2 389 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 MOB4Q9Y3A3 225 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 CHD8Q9HCK8 2581 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 PITX3O75364 302 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV3-48P01763 117 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 SRSF12Q8WXF0 261 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 FGF8P55075 233 aaPredicted RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 TBL2Q9Y4P3 447 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 OR5AC2Q9NZP5 309 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 PXMP4Q9Y6I8 212 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 FREM1Q5H8C1 2179 aa11.63□□□□□ -0.55
SMARCA4-204ENST00000444061 HSBP1O75506 76 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 HKR1P10072 659 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 MAS1LP35410 378 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 TMEM219Q86XT9 240 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 TEX45Q8NA69 505 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 ZNF737O75373 536 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 NPPCP23582 126 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 GAMTQ14353 236 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 WDR73Q6P4I2 378 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 SMIM8Q96KF7 97 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 SDHCQ99643 169 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 UPK2O00526 184 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 CA2P00918 260 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 SULT1A2P50226 295 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 ELOVL1Q9BW60 279 aa11.62□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 SAA4P35542 130 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 CFHR2P36980 270 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 RTBDNQ9BSG5 229 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 MANBALQ9NQG1 85 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 C21orf62Q9NYP8 219 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 RRHO14718 337 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 KHDC3LQ587J8 217 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 NAGKQ9UJ70 344 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 FAM74A7A6NL05 159 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 CHEK1O14757 476 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV3-11P01762 117 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 FCGR2BP31994 310 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 WDR86Q86TI4 376 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 DMRT1Q9Y5R6 373 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 RPLP1P05386 114 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 DLK1P80370 383 aa11.61□□□□□ -0.55
SMARCA4-204ENST00000444061 EBLN2Q6P2I7 272 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 LDLRAD3Q86YD5 345 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 OR11H4Q8NGC9 324 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 S4R3C0 116 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 ARL2-SNX15V9GYD0 113 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 BUB1B-PAK6H3BSN5 160 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 ZNF137PP52743 207 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 SLC25A48Q6ZT89 311 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 C11orf44Q8N8P7 122 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 PAXXQ9BUH6 204 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 IGHV2-70DA0A0C4DH43 119 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 H3BQ15 152 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
SMARCA4-204ENST00000444061 WNT10AQ9GZT5 417 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms