RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MYF5P13349 255 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 HBBP68871 147 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ZNF645Q8N7E2 425 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 C11orf52Q96A22 123 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 C1QTNF5Q9BXJ0 243 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 ZNF835Q9Y2P0 537 aa4.2□□□□□ -1.74
HERC1-201ENST00000443617 F11RQ9Y624 299 aaKnown RBP4.2□□□□□ -1.74
HERC1-201ENST00000443617 IGLC1P0CG04 106 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 SLAQ13239 276 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 CD300EQ496F6 205 aaPredicted RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 ZDHHC16Q969W1 377 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 ZNF414Q96IQ9 312 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 WDR83OSQ9Y284 106 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 ADAMTSL5Q6ZMM2 481 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 MTURNQ8N3F0 131 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 OR4F17Q8NGA8 305 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 C18orf32Q8TCD1 76 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 RAB37Q96AX2 223 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 CSN3P07498 182 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 NBEAP1P0C6P0 100 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 RIGQ13278 110 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 CYC1P08574 325 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 C19orf24Q9BVV8 132 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 FAM234AQ9H0X4 552 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 FOXB1Q99853 325 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 NAA38Q9BRA0 125 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 SLC25A10Q9UBX3 287 aaPredicted RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 POLDIP2Q9Y2S7 368 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 GRPP07492 148 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 CSN1S1P47710 185 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 MZT1Q08AG7 82 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 SH2D7A6NKC9 451 aaPredicted RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 H1FXQ92522 213 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 TMUB1Q9BVT8 246 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 TPPP3Q9BW30 176 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 MRPS17Q9Y2R5 130 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 UBE2L3P68036 154 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 GUSBP1Q15486 140 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 OR1C1Q15619 314 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 TEPPQ6URK8 271 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 RBMXL3Q8N7X1 1067 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 OR52E5Q8NH55 327 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 FLYWCH2Q96CP2 140 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 TMEM238LA0A1B0GVL6 79 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 A8MWL6 223 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 IGFBP2P18065 325 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 TFF2Q03403 129 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 RNPS1Q15287 305 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 ABHD12Q8N2K0 398 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 THYN1Q9P016 225 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 B4GALT7Q9UBV7 327 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 RRHO14718 337 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 PAXXQ9BUH6 204 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 CXCL13O43927 109 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 WDR74Q6RFH5 385 aaPredicted RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 ZNF497Q6ZNH5 498 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 NUP35Q8NFH5 326 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 FBLL1A6NHQ2 334 aaKnown RBP4.19□□□□□ -1.74
HERC1-201ENST00000443617 CD46P15529 392 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 BLNKQ8WV28 456 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 ATP6V0BQ99437 205 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 SRXN1Q9BYN0 137 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 SELENOKQ9Y6D0 94 aa4.19□□□□□ -1.74
HERC1-201ENST00000443617 PLA2G5P39877 138 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 AESQ08117 197 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 FADS6Q8N9I5 356 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 FOXA3P55318 350 aaPredicted RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 SLC23A3Q6PIS1 610 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 NGFP01138 241 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 RBPMS2Q6ZRY4 209 aaKnown RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 TRBV20OR9-2A0A075B6H5 130 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 TCTAP57738 103 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 IBA57Q5T440 356 aaKnown RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 VKORC1L1Q8N0U8 176 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 KIR3DL3Q8N743 410 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 OR10D3Q8NH80 312 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 K7EQM0 130 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 GOSR1O95249 250 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 EDDM3AQ14507 147 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 EBLN2Q6P2I7 272 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 MPC1Q9Y5U8 109 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 A0A0J9YW62 118 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 GCSHP23434 173 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 REG1BP48304 166 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 RAB9AP51151 201 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 FAM216AQ8WUB2 273 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 OCIAD1Q9NX40 245 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 IDI2-AS1Q9NZ38 188 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 PRRC2CQ9Y520 2896 aaKnown RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 A0A1W2PRE2 83 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 COX8AP10176 69 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 GABRG2P18507 467 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 OR2Z1Q8NG97 314 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 RAB1CQ92928 201 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
HERC1-201ENST00000443617 AGRNO00468 2067 aa4.18□□□□□ -1.74
HERC1-201ENST00000443617 OR2H2O95918 312 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms