RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 IGHV1-8P0DP01 117 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 LYL1P12980 280 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 PAX9P55771 341 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 LY6EQ16553 131 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 CCDC144NLQ6NUI1 221 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 PDPNQ86YL7 162 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 OR51G1Q8NGK1 321 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 TMEM167BQ9NRX6 74 aa8.7□□□□□ -1.02
CALD1-210ENST00000443197 TRBV23-1A0A0A0MS06 115 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 HELTA6NFD8 242 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 UQCRFS1P47985 274 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 PNRC1Q12796 327 aaPredicted RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 IL15RAQ13261 267 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 FXYD3Q14802 87 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 MS4A10Q96PG2 267 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 TOLLIPQ9H0E2 274 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 C1RLQ9NZP8 487 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 FREM2Q5SZK8 3169 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 USP34Q70CQ2 3546 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 IGHV3-23P01764 117 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 FAM3BP58499 235 aaPredicted RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 PARLQ9H300 379 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 C15orf65H3BRN8 121 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 K7EQM0 130 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 CSN1S1P47710 185 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 USF2Q15853 346 aaPredicted RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 C17orf58Q2M2W7 97 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 RPP25LQ8N5L8 163 aaKnown RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 NEU4Q8WWR8 484 aaPredicted RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 AUP1Q9Y679 476 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 ARHGAP21Q5T5U3 1957 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 C9JQL5 133 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
CALD1-210ENST00000443197 ATP5G3P48201 142 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 BORCS7Q96B45 105 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 CCL19Q99731 98 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 PAXXQ9BUH6 204 aa8.69□□□□□ -1.02
CALD1-210ENST00000443197 TIMM23O14925 209 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 RBFOX2O43251 390 aaKnown RBP eCLIP8.68□□□□□ -1.02
CALD1-210ENST00000443197 NDUFS7O75251 213 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 CLN5O75503 358 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 DIAPH2-AS1Q14236 149 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 TMEM30BQ3MIR4 351 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 C16orf82Q7Z2V1 217 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 CLDND2Q8NHS1 167 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 CHODLQ9H9P2 273 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 IGHV2-26A0A0B4J1V2 119 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 TEX50A0A1B0GTY4 177 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 LOC102723971A0A1B0GUV8 181 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 WNT2P09544 360 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 CRYBB3P26998 211 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 GATA4P43694 442 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 RELBQ01201 579 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 HLA-DRB5Q30154 266 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 OR8I2Q8N0Y5 310 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 OR4F17Q8NGA8 305 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 RBM14Q96PK6 669 aaKnown RBP8.68□□□□□ -1.02
CALD1-210ENST00000443197 CTDSP1Q9GZU7 261 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 ZNF430Q9H8G1 570 aaPredicted RBP8.68□□□□□ -1.02
CALD1-210ENST00000443197 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 HYPMO75409 117 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 KDF1Q8NAX2 398 aaPredicted RBP8.68□□□□□ -1.02
CALD1-210ENST00000443197 OR10G8Q8NGN5 311 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 OR2T10Q8NGZ9 312 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 C12orf57Q99622 126 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 SMDT1Q9H4I9 107 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 HIVEP3Q5T1R4 2406 aa8.68□□□□□ -1.02
CALD1-210ENST00000443197 IGHV3OR16-13A0A075B7E8 117 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 TGIF2-C20orf24A0A0A6YYL0 155 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 IGHV3-74A0A0B4J1X5 117 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 DNASE2O00115 360 aaPredicted RBP8.67□□□□□ -1.02
CALD1-210ENST00000443197 PDE6DO43924 150 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 CLEC3BP05452 202 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 CT45A10P0DMU9 189 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 TDGF1P3P51864 188 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 MST1LQ2TV78 715 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 TMEM14EPQ6UXP3 125 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 KIR3DL3Q8N743 410 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 EXPH5Q8NEV8 1989 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 USP9YO00507 2555 aaPredicted RBP8.67□□□□□ -1.02
CALD1-210ENST00000443197 FAM106CPP0CH98 169 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 CAMPP49913 170 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 ICAM4Q14773 271 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 GUSBP1Q15486 140 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 ZNF506Q5JVG8 444 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 UNQ5815/PRO19632Q6UWF5 114 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 PPP1R14DQ9NXH3 145 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 CARHSP1Q9Y2V2 147 aaKnown RBP8.67□□□□□ -1.02
CALD1-210ENST00000443197 TRAPPC1Q9Y5R8 145 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 TLN2Q9Y4G6 2542 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 COX6B1P14854 86 aa8.67□□□□□ -1.02
CALD1-210ENST00000443197 SLC25A48Q6ZT89 311 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms