RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
HMGN1-208ENST00000443046 IGKV3-7A0A075B6H7 116 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 IGHV3-49A0A0A0MS15 119 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 TRAV14DV4A0A0A6YYC5 116 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 CD5P06127 495 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 CADM3Q8N126 398 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 UBAC2Q8NBM4 344 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 OR1L8Q8NGR8 309 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 CMTM3Q96MX0 182 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 VSIRQ9H7M9 311 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
HMGN1-208ENST00000443046 TMEM235A6NFC5 223 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 M0R2N4 97 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 FCGR2CP31995 323 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 DEFB131AP59861 70 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 PAFAH1B2P68402 229 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 Q56UQ5 140 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 OGFRL1Q5TC84 451 aaPredicted RBP10.38□□□□□ -0.75
HMGN1-208ENST00000443046 LEMD1Q68G75 181 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 Q6ZR54 194 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 TCF24Q7RTU0 167 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
HMGN1-208ENST00000443046 ZNF575Q86XF7 245 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 FAM24BQ8N5W8 94 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 OR13F1Q8NGS4 319 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 GIMAP1Q8WWP7 306 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 LSM10Q969L4 123 aaKnown RBP10.38□□□□□ -0.75
HMGN1-208ENST00000443046 MGLLQ99685 303 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 NXF2Q9GZY0 626 aaKnown RBP10.38□□□□□ -0.75
HMGN1-208ENST00000443046 MS4A6AQ9H2W1 248 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 COMMD9Q9P000 198 aa10.38□□□□□ -0.75
HMGN1-208ENST00000443046 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 I3L2K1 104 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 NUPL2O15504 423 aaKnown RBP10.37□□□□□ -0.75
HMGN1-208ENST00000443046 PPYP01298 95 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 PTHLHP12272 177 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 RAB3BP20337 219 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 CATR1Q13166 79 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 C12orf74Q32Q52 190 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 OR1P1Q8NH06 330 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 TXN2Q99757 166 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 CELA1Q9UNI1 258 aa10.37□□□□□ -0.75
HMGN1-208ENST00000443046 DEFB131BA0A096LNP1 70 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 MARCH11A6NNE9 402 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 CASQ2O14958 399 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-208ENST00000443046 YIF1AO95070 293 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
HMGN1-208ENST00000443046 ZNF818PQ6ZRF7 136 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 SCRT1Q9BWW7 348 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 SLC5A7Q9GZV3 580 aa10.36□□□□□ -0.75
HMGN1-208ENST00000443046 RGS10O43665 173 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 CD74P04233 296 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 SPP1P10451 314 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 C4BPBP20851 252 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 GNG2P59768 71 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 MORN3Q6PF18 240 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-208ENST00000443046 STHQ8IWL8 128 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 BEST4Q8NFU0 473 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 PLA2G2EQ9NZK7 142 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 TPRKBQ9Y3C4 175 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 OR51B2Q9Y5P1 312 aa10.35□□□□□ -0.75
HMGN1-208ENST00000443046 TRDV1A0A1B0GX56 115 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 DNASE2O00115 360 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-208ENST00000443046 SCGNO76038 276 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 MFAP4P55083 255 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 RCN1Q15293 331 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 TOMM20LQ6UXN7 152 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 PRSS48Q7RTY5 328 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 HOGA1Q86XE5 327 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 OR51H1Q8NH63 302 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 SLC25A46Q96AG3 418 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 HINT2Q9BX68 163 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
HMGN1-208ENST00000443046 DBX1A6NMT0 343 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 ST8SIA3O43173 380 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 CDK2AP2O75956 126 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 MYL9P24844 172 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 GNRHRP30968 328 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 ARPC4P59998 168 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 AADACL3Q5VUY0 350 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 CENPSQ8N2Z9 138 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 GINS3Q9BRX5 216 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 ZFAND3Q9H8U3 227 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 TMEM14BQ9NUH8 114 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 NDUFB11Q9NX14 153 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 TBC1D24Q9ULP9 559 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 NSG2Q9Y328 171 aa10.33□□□□□ -0.76
HMGN1-208ENST00000443046 K7EQG2 157 aa10.32□□□□□ -0.76
HMGN1-208ENST00000443046 F2RP25116 425 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms