RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 SIGLEC9Q9Y336 463 aa10.6□□□□□ -0.71
CPSF4-206ENST00000441580 TBL2Q9Y4P3 447 aaKnown RBP10.6□□□□□ -0.71
CPSF4-206ENST00000441580 M0R036 132 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 NDUFS7O75251 213 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 MT-CO2P00403 227 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 DLX1P56177 255 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 RHOBP62745 196 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 MEF2BQ02080 365 aaPredicted RBP10.59□□□□□ -0.71
CPSF4-206ENST00000441580 PAX2Q02962 417 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 HNF4GQ14541 408 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 TNXAQ16473 311 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 C10orf55Q5SWW7 151 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 HCP5Q6MZN7 132 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 PPP1R27Q86WC6 154 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 CYB561D1Q8N8Q1 229 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 C22orf15Q8WYQ4 148 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 SIRPDQ9H106 197 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 SMCO4Q9NRQ5 59 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 ABCA4P78363 2273 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 NBASA2RRP1 2371 aa10.59□□□□□ -0.71
CPSF4-206ENST00000441580 IGLC7A0M8Q6 106 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 CGB1A6NKQ9 187 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 TMEM250H0YL14 139 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 NBR2O15453 112 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 YIF1AO95070 293 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 MOSP00540 346 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PRR20EP86478 221 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PRR20CP86479 221 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PRR20DP86480 221 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PRR20BP86481 221 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PRR20AP86496 221 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 WT1-ASQ06250 92 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-206ENST00000441580 KLRD1Q13241 179 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 PLGLAQ15195 96 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 OR10W1Q8NGF6 305 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 CFHR4Q92496 578 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 TXNDC17Q9BRA2 123 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 C19orf24Q9BVV8 132 aa10.58□□□□□ -0.72
CPSF4-206ENST00000441580 POLR3KQ9Y2Y1 108 aaPredicted RBP10.58□□□□□ -0.72
CPSF4-206ENST00000441580 TPRP12270 2363 aaKnown RBP10.58□□□□□ -0.72
CPSF4-206ENST00000441580 TSPAN4O14817 238 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 NDUFA3O95167 84 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 CXorf1O96002 111 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 LGALS4P56470 323 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 MMDQ15546 238 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 MRGPRG-AS1Q2M3A8 158 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 PVRIGQ6DKI7 326 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 IQCF2Q8IXL9 164 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 SSMEM1Q8WWF3 244 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 RNF2Q99496 336 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 SLC45A2Q9UMX9 530 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 ARL2-SNX15V9GYD0 113 aa10.57□□□□□ -0.72
CPSF4-206ENST00000441580 TOX4O94842 621 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 STAG3L2P0CL84 134 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 STAG3L3P0CL85 134 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
CPSF4-206ENST00000441580 LMO4P61968 165 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 LCN2P80188 198 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 PRB3Q04118 309 aaPredicted RBP10.56□□□□□ -0.72
CPSF4-206ENST00000441580 GAMTQ14353 236 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 CLEC2AQ6UVW9 174 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 NPBQ8NG41 125 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 OR2T10Q8NGZ9 312 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 OR1P1Q8NH06 330 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 SRSF12Q8WXF0 261 aaKnown RBP10.56□□□□□ -0.72
CPSF4-206ENST00000441580 FAM168AQ92567 244 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 C1orf159Q96HA4 380 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 MRPL32Q9BYC8 188 aaKnown RBP10.56□□□□□ -0.72
CPSF4-206ENST00000441580 LPAR2Q9HBW0 351 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 RPS10P5Q9NQ39 176 aa10.56□□□□□ -0.72
CPSF4-206ENST00000441580 C7orf77A4D0Y5 90 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 H3BQ15 152 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 SNRNP70P08621 437 aaKnown RBP10.55□□□□□ -0.72
CPSF4-206ENST00000441580 CNTFRP26992 372 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 OR10J1P30954 320 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 UBE2E1P51965 193 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 CEBPGP53567 150 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 BPIFB3P59826 476 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 SELENOTP62341 195 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 GNB1P62873 340 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 GCSAMLQ5JQS6 135 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 TMEM88Q6PEY1 159 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 CYP2G1PQ6ZSU1 146 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 C15orf54Q8N8G6 183 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 THAP8Q8NA92 274 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 OR1L6Q8NGR2 347 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 RITA1Q96K30 269 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 FBXL15Q9H469 300 aa10.55□□□□□ -0.72
CPSF4-206ENST00000441580 PUS1Q9Y606 427 aaKnown RBP eCLIP10.55□□□□□ -0.72
CPSF4-206ENST00000441580 F11RQ9Y624 299 aaKnown RBP10.55□□□□□ -0.72
CPSF4-206ENST00000441580 A0A087WWC5 75 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms