RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 Q6ZTK2 550 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 Q6ZUT4 128 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 SUMF1Q8NBK3 374 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 OR2T35Q8NGX2 323 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 WDFY3Q8IZQ1 3526 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 TMEM235A6NFC5 223 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 VWC2LB2RUY7 222 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 F5H5P2 479 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 CD38P28907 300 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 SEC61A1P61619 476 aaKnown RBP8.54□□□□□ -1.04
SYNE2-206ENST00000441438 MLANAQ16655 118 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 ANXA2RQ3ZCQ2 193 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 C17orf64Q86WR6 236 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 PRSS33Q8NF86 280 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 OR5D16Q8NGK9 328 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 CT55Q8WUE5 264 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 LINC00312Q9Y6C7 94 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 FRYLO94915 3013 aa8.54□□□□□ -1.04
SYNE2-206ENST00000441438 HEATR5BQ9P2D3 2071 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 HMSDA8MTL9 139 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 OR2A4O95047 310 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 MT-ATP8P03928 68 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-206ENST00000441438 IL15RAQ13261 267 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 ZNF506Q5JVG8 444 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 ZNF660Q6AZW8 331 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-206ENST00000441438 LYPD4Q6UWN0 246 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 LCN15Q6UWW0 184 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 OR2A7Q96R45 310 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 WDR13Q9H1Z4 485 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 COL5A1P20908 1838 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-206ENST00000441438 UBL3O95164 117 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 MIDNQ504T8 468 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 ALG10Q5BKT4 473 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 LYRM7Q5U5X0 104 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 TOMM5Q8N4H5 51 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 DEFB125Q8N687 156 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 C15orf40Q8WUR7 153 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
SYNE2-206ENST00000441438 CACNA1CQ13936 2221 aa8.53□□□□□ -1.04
SYNE2-206ENST00000441438 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
SYNE2-206ENST00000441438 EIF4EP06730 217 aaKnown RBP8.52□□□□□ -1.04
SYNE2-206ENST00000441438 COX5AP20674 150 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 SRP14P37108 136 aaKnown RBP8.52□□□□□ -1.04
SYNE2-206ENST00000441438 LCN12Q6JVE5 192 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 PRIMA1Q86XR5 153 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 FBXL14Q8N1E6 418 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 RARRES2Q99969 163 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 MRPL32Q9BYC8 188 aaKnown RBP8.52□□□□□ -1.04
SYNE2-206ENST00000441438 SPRY4Q9C004 299 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 DEPPQ9NTK1 212 aa8.52□□□□□ -1.04
SYNE2-206ENST00000441438 SAA2-SAA4A0A096LPE2 208 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 MCRIP1C9JLW8 97 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 ATP5G1P05496 136 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 NFYAP23511 347 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-206ENST00000441438 SAA4P35542 130 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 SNCAP37840 140 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 SLC35A1P78382 337 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 KLF9Q13886 244 aaPredicted RBP8.52□□□□□ -1.05
SYNE2-206ENST00000441438 NR2C2APQ86WQ0 139 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 LINC00528Q8N1L1 170 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 DNAJA3Q96EY1 480 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 NUP210LQ5VU65 1888 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 PLXNB3Q9ULL4 1909 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 IGLV3-16A0A075B6K0 115 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 A0A0U1RQV1 116 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 K7EP34 96 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 TRGC1P0CF51 173 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 FKBP2P26885 142 aaKnown RBP8.52□□□□□ -1.05
SYNE2-206ENST00000441438 PRSS3P35030 304 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 SLC25A26Q70HW3 274 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 RPRMQ9NS64 109 aa8.52□□□□□ -1.05
SYNE2-206ENST00000441438 A0A1W2PP11 408 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 NAP1L6A6NFF2 107 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 SHISA9B4DS77 424 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 RER1O15258 196 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 IFITM1P13164 125 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 PFN2P35080 140 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 KCNRGQ8N5I3 272 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 SEC16AO15027 2179 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 A0A1B0GV50 99 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 C7orf77A4D0Y5 90 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 J3QRE1 110 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 LPAR6P43657 344 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 SP6Q3SY56 376 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 Q499Y3 187 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 OR4B1Q8NGF8 309 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 STARD4Q96DR4 205 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 DOCK8Q8NF50 2099 aa8.51□□□□□ -1.05
SYNE2-206ENST00000441438 UNC119BA6NIH7 251 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 CD300LBA8K4G0 201 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 KLF7O75840 302 aaPredicted RBP8.5□□□□□ -1.05
SYNE2-206ENST00000441438 ARL6IP5O75915 188 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 IGLV3-19P01714 112 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 PLA2G1BP04054 148 aaKnown RBP8.5□□□□□ -1.05
SYNE2-206ENST00000441438 MRPL3P09001 348 aaKnown RBP8.5□□□□□ -1.05
SYNE2-206ENST00000441438 TAS2R46P59540 309 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 Q6ZN92 141 aa8.5□□□□□ -1.05
SYNE2-206ENST00000441438 C11orf53Q8IXP5 236 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms