RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 RBM14Q96PK6 669 aaKnown RBP16.07■□□□□ 0.16
VRK2-207ENST00000440705 SLC25A32Q9H2D1 315 aa16.07■□□□□ 0.16
VRK2-207ENST00000440705 SOX21Q9Y651 276 aaPredicted RBP16.07■□□□□ 0.16
VRK2-207ENST00000440705 CREBBPQ92793 2442 aa16.07■□□□□ 0.16
VRK2-207ENST00000440705 ABCA1O95477 2261 aa16.07■□□□□ 0.16
VRK2-207ENST00000440705 PRSS46E5RG02 174 aa16.06■□□□□ 0.16
VRK2-207ENST00000440705 SPP1P10451 314 aa16.06■□□□□ 0.16
VRK2-207ENST00000440705 VWC2Q2TAL6 325 aa16.06■□□□□ 0.16
VRK2-207ENST00000440705 TUSC1Q2TAM9 212 aa16.06■□□□□ 0.16
VRK2-207ENST00000440705 HECTD1Q9ULT8 2610 aa16.06■□□□□ 0.16
VRK2-207ENST00000440705 TEX22C9J3V5 150 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 HLA-DRB1P01911 266 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 CX3CL1P78423 397 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 DLK1P80370 383 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 C9orf139Q6ZV77 190 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 ZNF114Q8NC26 417 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 SLC25A33Q9BSK2 321 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 PITPNC1Q9UKF7 332 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 UBE2L5PA0A1B0GUS4 154 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 ATP6V0CP27449 155 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 NDUFA5Q16718 116 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 CLLU1Q5K131 121 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 FAM74A1Q5RGS3 127 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 LRRC20Q8TCA0 184 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 RNF141Q8WVD5 230 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 SSMEM1Q8WWF3 244 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 P2RX4Q99571 388 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 WDR61Q9GZS3 305 aaKnown RBP16.05■□□□□ 0.16
VRK2-207ENST00000440705 MOB4Q9Y3A3 225 aa16.05■□□□□ 0.16
VRK2-207ENST00000440705 CCDC168Q8NDH2 2452 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 H3BUX3 64 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 FGF16O43320 207 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 AREGP15514 252 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 RNASEH2CQ8TDP1 164 aaKnown RBP16.04■□□□□ 0.16
VRK2-207ENST00000440705 ABHD5Q8WTS1 349 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 ARPC1AQ92747 370 aa16.04■□□□□ 0.16
VRK2-207ENST00000440705 ITPR3Q14573 2671 aa16.03■□□□□ 0.16
VRK2-207ENST00000440705 FNDC10F2Z333 226 aa16.03■□□□□ 0.16
VRK2-207ENST00000440705 DEFB112Q30KQ8 113 aa16.03■□□□□ 0.16
VRK2-207ENST00000440705 TAF15Q92804 592 aaKnown RBP eCLIP16.03■□□□□ 0.16
VRK2-207ENST00000440705 SH3BGRL3Q9H299 93 aa16.03■□□□□ 0.16
VRK2-207ENST00000440705 RPS10-NUDT3A0A1W2PQS6 291 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 A6NDX4 124 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 REG1AP05451 166 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 TMEM219Q86XT9 240 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 BCL6BQ8N143 479 aaPredicted RBP16.02■□□□□ 0.16
VRK2-207ENST00000440705 C5orf56Q8N8D9 126 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 OR1P1Q8NH06 330 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 CACNG8Q8WXS5 425 aa16.02■□□□□ 0.16
VRK2-207ENST00000440705 CELSR1Q9NYQ6 3014 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 CSPG4Q6UVK1 2322 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 IGHV7-81A0A0B4J1V7 117 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 APELAP0DMC3 54 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 GPX4P36969 197 aaPredicted RBP16.02■□□□□ 0.15
VRK2-207ENST00000440705 RUNX1Q01196 453 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 OR2G3Q8NGZ4 309 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 NPVFQ9HCQ7 196 aa16.02■□□□□ 0.15
VRK2-207ENST00000440705 SVEP1Q4LDE5 3571 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 CSMD1Q96PZ7 3565 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 ZANQ9Y493 2812 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 SMCO3A2RU48 225 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 M0QZK8 103 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 CORTO00230 105 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 CD5LO43866 347 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 NMBP08949 121 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 FAM157CP0CG43 387 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 MDKP21741 143 aaPredicted RBP16.01■□□□□ 0.15
VRK2-207ENST00000440705 SULT1A2P50226 295 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 PVRIGQ6DKI7 326 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 C16orf82Q7Z2V1 217 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 C22orf15Q8WYQ4 148 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 PSMG3Q9BT73 122 aaPredicted RBP16.01■□□□□ 0.15
VRK2-207ENST00000440705 WDR83OSQ9Y284 106 aa16.01■□□□□ 0.15
VRK2-207ENST00000440705 F11RQ9Y624 299 aaKnown RBP16.01■□□□□ 0.15
VRK2-207ENST00000440705 MDFIC2A0A1B0GVS7 189 aa16■□□□□ 0.15
VRK2-207ENST00000440705 MPDU1O75352 247 aa16■□□□□ 0.15
VRK2-207ENST00000440705 FGF7P21781 194 aa16■□□□□ 0.15
VRK2-207ENST00000440705 RAB5CP51148 216 aa16■□□□□ 0.15
VRK2-207ENST00000440705 CD69Q07108 199 aa16■□□□□ 0.15
VRK2-207ENST00000440705 OR1L6Q8NGR2 347 aa16■□□□□ 0.15
VRK2-207ENST00000440705 FAM103A1Q9BTL3 118 aaKnown RBP16■□□□□ 0.15
VRK2-207ENST00000440705 UMAD1C9J7I0 102 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 CTRB1P17538 263 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 LY6EQ16553 131 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 ARSJQ5FYB0 599 aaPredicted RBP15.99■□□□□ 0.15
VRK2-207ENST00000440705 CTRB2Q6GPI1 263 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 BTNL8Q6UX41 500 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 PCNPQ8WW12 178 aaKnown RBP15.99■□□□□ 0.15
VRK2-207ENST00000440705 TIMM9Q9Y5J7 89 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 TSPAN9O75954 239 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 SERF2P84101 59 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 NDPQ00604 133 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 ETFRF1Q6IPR1 90 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 TREML4Q6UXN2 200 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 CENPVQ7Z7K6 275 aaPredicted RBP15.99■□□□□ 0.15
VRK2-207ENST00000440705 ZNF709Q8N972 641 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 OR5R1Q8NH85 324 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 SAT2Q96F10 170 aaPredicted RBP15.99■□□□□ 0.15
VRK2-207ENST00000440705 HSPB9Q9BQS6 159 aa15.99■□□□□ 0.15
VRK2-207ENST00000440705 RSG1Q9BU20 258 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms